Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2492 ATGGGAACAGGTTGGAGACGAGCATTTTGCACTCGTGACCCTGAATCCACCATATCCGATAAGCAGCAGAGAGGCACGAGTCCAAGCCCCAGTCCTAGAAGTTGTGTCCGATTGGGTTTTCTCTCCGGCGGAAGCAACCCTTCCACGCCACGCTTGCAGCAGCAATCTCAAGCTGTGTCTAGTCTTAGCTTGCGTTGCCCGACAGTTTCAGAAGCAGCAGCAAACGTGAATGAGAGCCCCAGATTTCAGAGCAAAACTACTCCCAGGGCAACCAAGTCGCCAAAAACCAGTTCTACCTCAAATCCCACATCTCCGCGCACTCCTTTGAAGTTATCTCTCTTCAGGAATAGCTTCAAATTCCGTAGTAGTTGTGGAATCTGTTTGAATAGCGTCAAAACCGGTCAGGGAACGGCCATTTACACTGCGGAATGTACTCACGCCTTTCACTTTCCCTGTATCGCTGATTATGTACGCAAACATGGAAGCCTCGTCTGCCCCGTCTGCAACGCTGCCTGGAAAGACGTGCCTCTCCTAGCCGCACACAAGAACCACGCCGCCGAATCCGCTGAAAAGAACGACTTCGTCGTGGTTGACAAGAGCGTTGTAAAACCAAATGCCACCCAGAAGACTAAGGAAGACTCATCCCCAGTTTTCAGAGTCAAGTCTATTGAACCGCCCCAACAATTACCACAAAAACAGCCAAAGCAACTTGATTCATACAGGTCCTACGACGATGATGAGCCACTTCTATCTCCCACAGCCGGTGGTGACCGAATCATTCCAATACCTGAAGCCGACGAGGATGCCGAAGAAGAAGACGAAGACGACGTTGAAGAATTCCAGGGATTTTTTGTCAACGCAAAATCTTCATCCTCAATCAAATCTTACTCTGATAAATTGCAAATAAACGACAAGGATTTCAGGAACGTTCAGGTGAAGTTGATCCCAGAGTGTGCCGTAGTGTCAGTCTCTCGAATTTACGAGACTTACGCTTTGGTTCTGAAAGTGAAGGCTCCTCTGCCGCCACCTCCGGCGCGTAGTGGCAACATCTCTACGACACCGCGTCTTGGTCAGTCGCAACGAGCTCCCATAGATCTCGTAACGGTTCTCGACATTGGTGGAAGCATGACAGGCGCGAAGCTGCACATGCTAAAGCGCGCGATGCGCTTGGTTATTTCTTCACTCAGCTCAGCCGACAGGCTCTCCATAGTGGCTTTCTCGGCCACTTCCAAGCGGCTCTTACCTTTGAGAAGAATGACGGCTCAAGGACAGCGTGTGGCTCGGCGTATGATCGATCGGCTCGTCTCGGGCCATGGGTCTTGTGTGGGCGATGCTCTGAGAAAAGCCACCAAAGTGCTCGAGGATCGCAGGGAGAGAAACCCGGTTGCCAGTGTAATGCTCCTATCGGACGGTCAAGATGAACGAGTCCAAAGCAGTAACATCAACAACCGACGAAAGTCCTCGAGCCACGCATCCTCGACCCGATTCGCCCACATCGAGATTCCGGTTCATGCGTTCGGGTTCGGGAAAAAGAGCGGCTTCAGCCACGAGCCGGCCGAGGATGCATTTGCCAAGTGCGTTGGCGGATTATTGAGTGTGGTTGTACAGGACTTGAGAATTCAGCTAGGCTTCCAATCTGGCTCATCGACGGCTGAAATCAGCGGCATCTATTTATGTGGCGGTCGAACTACAGCACTGAGCTCAGGCTGCGTACGGCTCGGCGACTTGTACGCCGGGGAAGAGAGGGAGCTACTGGTGGAGCTGAGAGTTCCAGCGTCGGATTTGGGGGCCCACCACGTGATGACGGTACGGTGCTTGTATAAGGACCCTGCTTCTCAAGAGATCGTATCTAGTAGGGAACAGGCCCTACTGGTTCCTCCACCTCAAGGCACGCGAAGCGAACGCTTGAGGAATTTCTTCATAGCCACCCGAGCCATAGCCGAGTCTCGCCGGCTCGTTGACTACAACGACTTAACGAGCGCTCATCATTTACTGGCTTCGGCTCGCGCGCTCTTGATGCAAGCTAAGTCGAGCTCTGCTGAGGAGCATGTGCGCGCGTTAGAAGCTGAGCTGGCAGAACTTCATTGGCGCACTCAAAACCCGATGAATCAGCAGACGATGACGCAGGAACGAAGGAGAGGGCACGAGAGGGAGATGACGAGCTTGGTGGATGATAATGGGGAGCCGCTCACGCCGACATCGGCTTGGAGAGCCGCTGAGAAGCTGGCTAAGGTGGCCATCATGAAGAAGTCATTGAACAGAGTCAGCGATTTGCACGGCTTCGAAAACGCTAGTCTCATCTCAGTATGTGACCTCAATAAATTGCAATTAGTACATCCTCAATACAAGGGGAAGCAACGATCGCCAACACAATTAATTCCTTTATGTGATATAGTACAGTGA 2403 0.5214 MGTGWRRAFCTRDPESTISDKQQRGTSPSPSPRSCVRLGFLSGGSNPSTPRLQQQSQAVSSLSLRCPTVSEAAANVNESPRFQSKTTPRATKSPKTSSTSNPTSPRTPLKLSLFRNSFKFRSSCGICLNSVKTGQGTAIYTAECTHAFHFPCIADYVRKHGSLVCPVCNAAWKDVPLLAAHKNHAAESAEKNDFVVVDKSVVKPNATQKTKEDSSPVFRVKSIEPPQQLPQKQPKQLDSYRSYDDDEPLLSPTAGGDRIIPIPEADEDAEEEDEDDVEEFQGFFVNAKSSSSIKSYSDKLQINDKDFRNVQVKLIPECAVVSVSRIYETYALVLKVKAPLPPPPARSGNISTTPRLGQSQRAPIDLVTVLDIGGSMTGAKLHMLKRAMRLVISSLSSADRLSIVAFSATSKRLLPLRRMTAQGQRVARRMIDRLVSGHGSCVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQSSNINNRRKSSSHASSTRFAHIEIPVHAFGFGKKSGFSHEPAEDAFAKCVGGLLSVVVQDLRIQLGFQSGSSTAEISGIYLCGGRTTALSSGCVRLGDLYAGEERELLVELRVPASDLGAHHVMTVRCLYKDPASQEIVSSREQALLVPPPQGTRSERLRNFFIATRAIAESRRLVDYNDLTSAHHLLASARALLMQAKSSSAEEHVRALEAELAELHWRTQNPMNQQTMTQERRRGHEREMTSLVDDNGEPLTPTSAWRAAEKLAKVAIMKKSLNRVSDLHGFENASLISVCDLNKLQLVHPQYKGKQRSPTQLIPLCDIVQ 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2492 800 MobiDBLite consensus disorder prediction 41 57 - -
Acco05g2492 800 SUPERFAMILY vWA-like 363 539 IPR036465 -
Acco05g2492 800 FunFam Probable E3 ubiquitin-protein ligase EDA40 365 530 - -
Acco05g2492 800 CDD RING-H2_WAVH2 121 174 - -
Acco05g2492 800 MobiDBLite consensus disorder prediction 75 109 - -
Acco05g2492 800 CDD vWA_C3HC4_type 364 535 - -
Acco05g2492 800 Gene3D von Willebrand factor, type A domain 365 533 IPR036465 -
Acco05g2492 800 SMART VWA_4 363 548 IPR002035 -
Acco05g2492 800 ProSiteProfiles VWFA domain profile. 365 509 IPR002035 -
Acco05g2492 800 Pfam RING-like zinc finger 124 153 IPR001841 -
Acco05g2492 800 MobiDBLite consensus disorder prediction 205 261 - -
Acco05g2492 800 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 122 762 - -
Acco05g2492 800 SMART ring_2 124 168 IPR001841 -
Acco05g2492 800 Pfam von Willebrand factor type A domain 366 472 IPR002035 -
Acco05g2492 800 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 179 IPR013083 -
Acco05g2492 800 MobiDBLite consensus disorder prediction 1 57 - -
Acco05g2492 800 ProSiteProfiles Zinc finger RING-type profile. 124 169 IPR001841 -
Acco05g2492 800 SUPERFAMILY RING/U-box 123 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2492 Acco-ChrAcco05 40643657 40648696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2492 122 174 C3H Transcription Factor Family AT1G74410 41.509 1.00e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2492 05 40643657 40648696 Acco05g2492 05 40643657 40648696 ECH