Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2487 ATGTTACTTCCCCCCACCTTCCCGCGTCGCTCTTCCCTCCTCCCACTCCTCTGTTTCATGTCAATCCTCGCCGGAGTCAACTCCGATGAACCAGAACTTCAAATTCTTCTAAACCTCAAAGCAGCTCTGCAGACATCAAATCCCACCGTGTTTGAGTCGTGGAACGATTCCAACTCAGTATGCAGATTCAATGGAATCACTTGCAATTCAAGCGGTTCGGTGACTGAAATCGATCTCTCCAATCACATCCTCTCTGGGGTTCTTCCTTTCGATTCCATTTGCCAGCTCCAATCACTCGAGAAGCTCTCATTTGGGTTCAATTCATTGTCTGGAAACATCTCCAACGATTTGAGCAACTGCGTCAAATTGAAGTACTTGGACTTGGGCAATAATATTTTCTCGGGAACGTTCCCTGAGATTTCAACTCTCACTCAATTGAGGTATCTGTATTTAAATCTGAGCGGTTTTTCTGGAACATTCCCATGGAAGTCGCTGCAAAATATGGCGAATCTTGAGGTGTTAAGCGTCGGAGATAACCCCTTTGACCTTACTCCTTTCCCTACAGAAGTTGTAAAGCTCAAGAATTTGAAATGGTTATATATGTCAAATTGCACTCTTGGTGGGAAAATACCAACAGGGATCGGTAACCTTACACAGCTCATAAACTTGGAATTTTCCGACAACTTTATATCTGGTGAGATTCCTACGGAGATTGGGAAGCTTCAGAATCTATGGCAGCTTGAGATGTACAACAATTCGTTGACTGGGAAGCTTCCATATGGGTTAAGAAACCTGACAAAGTTAGAGCTCTTTGACGCGTCAATGAATAATCTTGCAGGCAATCTTTCTGAATTGAGGTTCTTGAGTAATCTCGTTTCTCTGCAATTATTTGAAAACGAATTCTCCGGGGAAATCCCGCGGGAGTTTGGTGAATTCGAAAAGCTTGTTAACTTATCGTTATACAGAAATAGCTTGACCGGTCCTATTCCTCAAAAGATAGGATCTTGGGCTGAGTTTGATTACATCGATGTGGCCGAGAATTTCTTAACTGGTCCTATTCCTCCAGATATGTGTAAACAGGGGAAGATGCACGCGCTGCTCGTTCTTCAGAACAAACTCACCGGAGTAATTCCGGCCACCTATTCAAACTGTTTATCTCTGCGTCGATTCAGAGTGAGCAATAATTCCCTCTCCGGTGTCATACCTCCTGGAATTTGGGGGTTGCCAAACGCAGAAATTATCGATATTGAATTGAATCGTTTGGGAGGTTCAATCACTTCAGATATCAAGAACGCGAAGACTCTGGCCCAAATATTCGCGAGTCAAAACCTCTTATCCGGTGAGATACCAGAAGAGATTTCAAAAGCTACCTCCTTGGTGACAGTTGACTTGAGCGAGAATCAAATTTCTGGGAAAATTCCAACGAATATGGGCGAGCTTAAACAATTAAGCAGTTTAAGTTTACAGAGCAACAAGTTATTTGGTTCAATCCCAGATTCTTTGGGTTCATGTATATCCCTCAGCGACATCAACCTATCACAAAATTCTCTATCGGAAAAAATGCCTTCTTCTCTGGGCTTTTTACCGGCTCTCAATTCTCTGAACCTGTCAAGAAATGAACTTTCTGGTGAAATTCCTGCTAGTTTTTCTCGTCTCCGATTGAGTCTCTTTGATTTATCAAATAACAAATTGGCAGGCCCAATTCCACCGAGTCTGTCTTTACAAGCTTATAACGGAAGCCTTGAGGGAAACTCCGATCTCTGCATCATGGACGTCGACGTGACCTCCTTCAAGCGTTGCTCTGTACATTCCGGCAATTCCAGACACTTCCGAACACTTCTCCTTTGCTTCTCAATAGGCTTAATCTTGCTCCTCCTTTGTGTAAGCCTTTACATGCAACTAAAGAAGAAGGAGAACTATCGAGAACGTTCTCTAAAGGAAGAGTCTTGGGATATAAAATCCTTCCACGTGCTAAGCTTCACAGAGGACGAGATTCTAGATTCCATCAAGCAAGAGAATCTCATAGGAAAAGGAGGCTCCGGGAACGTGTACAGAGTCACTCTCTCCAACGGGAAAGACCTCGCCGTCAAGCACATATGGAACACCGACACCAGCGGCCGAAAAAGGAGCCGGAGCAGTGCTCCGATGATCGGAAAACGTGGGGGGGAATCAAAGGAATTTGACGCCGAAGTTCAGGCACTGAGTTCAATAAGGCACGTGAATGTGGTGAAACTATATTGCAGCATAACAAGCGAGGATTCAAATTTGTTGGTGTACGAATATTTGCCAAATGGGAGTTTGTGGGATATGCTTCATAAGAACAAGAAGATGGAGCTTGATTGGGAGACAAGGTACGAGATTGCCGTAGGAGCAGCGAAAGGATTGGAGTACCTTCATCATGGGTACGAGAGGCCTGTGATTCACAGGGACGTCAAGTCGAGTAACATTTTGTTGGATGAGTTTTTGAAGCCCAGAATTGCTGATTTTGGATTAGCTAAGATTGTTCAAGCCAACGTTGGCAAAGATTCCACTCATCTAGTTGCTGGAACTCACGGCTATATTGCCCCCGAATATGGGTACACATACAAGGTGAATGAGAAGATTGATGTTTATAGTTTTGGAGTGGTGCTAATGGAGCTAGTGATGGGGAAGAGGCCAATGGAGCCGGAATTTGGGGAGAAGGAAGACATAGTGAACTGGGTGTGCAGCAAAGTGCAGCAAGAGAACAGGGAGAAAATAATGGCAATGGTGGACTCAAGAATCGCAGATGTTTACAGAGAGGAGGCAATGAAGGTGATGAGGATAGCTATTATGTGCACAGCCAGGGTTCCAGCAGTGAGACCCACCATGAGAAGTGTGGTTCATATGCTGGAGGATGCTAAGCCTCTTAAGATGGTGGGAATTGTGGTCACCAAAGATGATGGTTCTACTAAGAAAGTGCAGGTCCATGAGGCTGCAAAGCTTCCATTGGGTCTGAAAAATTAA 2985 0.4432 MLLPPTFPRRSSLLPLLCFMSILAGVNSDEPELQILLNLKAALQTSNPTVFESWNDSNSVCRFNGITCNSSGSVTEIDLSNHILSGVLPFDSICQLQSLEKLSFGFNSLSGNISNDLSNCVKLKYLDLGNNIFSGTFPEISTLTQLRYLYLNLSGFSGTFPWKSLQNMANLEVLSVGDNPFDLTPFPTEVVKLKNLKWLYMSNCTLGGKIPTGIGNLTQLINLEFSDNFISGEIPTEIGKLQNLWQLEMYNNSLTGKLPYGLRNLTKLELFDASMNNLAGNLSELRFLSNLVSLQLFENEFSGEIPREFGEFEKLVNLSLYRNSLTGPIPQKIGSWAEFDYIDVAENFLTGPIPPDMCKQGKMHALLVLQNKLTGVIPATYSNCLSLRRFRVSNNSLSGVIPPGIWGLPNAEIIDIELNRLGGSITSDIKNAKTLAQIFASQNLLSGEIPEEISKATSLVTVDLSENQISGKIPTNMGELKQLSSLSLQSNKLFGSIPDSLGSCISLSDINLSQNSLSEKMPSSLGFLPALNSLNLSRNELSGEIPASFSRLRLSLFDLSNNKLAGPIPPSLSLQAYNGSLEGNSDLCIMDVDVTSFKRCSVHSGNSRHFRTLLLCFSIGLILLLLCVSLYMQLKKKENYRERSLKEESWDIKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYRVTLSNGKDLAVKHIWNTDTSGRKRSRSSAPMIGKRGGESKEFDAEVQALSSIRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDMLHKNKKMELDWETRYEIAVGAAKGLEYLHHGYERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANVGKDSTHLVAGTHGYIAPEYGYTYKVNEKIDVYSFGVVLMELVMGKRPMEPEFGEKEDIVNWVCSKVQQENREKIMAMVDSRIADVYREEAMKVMRIAIMCTARVPAVRPTMRSVVHMLEDAKPLKMVGIVVTKDDGSTKKVQVHEAAKLPLGLKN 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2487 994 FunFam Receptor-like protein kinase HAIKU2 652 761 - -
Acco05g2487 994 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 762 973 - -
Acco05g2487 994 FunFam Leucine-rich repeat receptor-like protein kinase TDR 285 602 - -
Acco05g2487 994 SMART serkin_6 669 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2487 994 Gene3D Ribonuclease Inhibitor 140 361 IPR032675 -
Acco05g2487 994 SUPERFAMILY Protein kinase-like (PK-like) 659 958 IPR011009 -
Acco05g2487 994 Gene3D Ribonuclease Inhibitor 31 139 IPR032675 -
Acco05g2487 994 Pfam Protein kinase domain 671 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2487 994 SUPERFAMILY L domain-like 287 588 - -
Acco05g2487 994 Pfam Leucine rich repeat 482 541 IPR001611 GO:0005515
Acco05g2487 994 ProSiteProfiles Protein kinase domain profile. 669 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2487 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Acco05g2487 994 Gene3D Transferase(Phosphotransferase) domain 1 762 975 - -
Acco05g2487 994 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Acco05g2487 994 FunFam Probable inactive receptor kinase RLK902 29 186 - -
Acco05g2487 994 Gene3D Phosphorylase Kinase; domain 1 653 761 - -
Acco05g2487 994 FunFam Leucine-rich receptor-like protein kinase family protein 187 284 - -
Acco05g2487 994 Gene3D Ribonuclease Inhibitor 474 596 IPR032675 -
Acco05g2487 994 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Acco05g2487 994 SUPERFAMILY L domain-like 59 357 - -
Acco05g2487 994 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 957 - -
Acco05g2487 994 Gene3D Ribonuclease Inhibitor 362 473 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2487 Acco-ChrAcco05 40591096 40594355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2487 7 973 Receptor kinase-like Gene Family AT1G09970 63.066 0.0 1197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco05g2487 Pkinase 1.7e-43 CL0016