Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2485 ATGGATCGCCAAACCATCTTCTTTCTTTTTGGACTCATATTTTCCTTCTCTCTTGCATCACAAGCCATCAGTGACGGACAATTGCAGTTTTTTTATCTAATGGAGAAGTCTCTCTCCGGGAAATACCCGCTAAATTGGGATTTAACAGAAGGAAAACCTGTCTGCAACTTCACTGGAGTAGTCTGCAACAACCAAGGGGAAGTCATCAATCTTGACATCTCTGGTTGGTCACTCTCAGGAAACTTCCCTTCAGATATATGTACTTATCTGCCAGAGTTACGATTTCTACGTCTCAGCCACAATCGTTTGAGAGGAAATTCCCTTGATAGCATCATCAACTGTTCTCACTTAGAAGAGCTTGACATGAATCATGTGTACCATACAGGCACCCTTCCAGATTTCTCACCCATGAAATCTCTAAGGATCCTGGATTTGTCATACAACTCCTTCAAAGGTCAGTTCCCGATGTCGGTATTTAATCTTACCAATCTTGAGGTGCTTAACTTCAACGAGAACGCTGGTTTCAACTTATGGGAGCTGCCGGAGGATATGCATAAGATGAAAAACCTCAAGTCTGTGATCTTGTCGACATGCTTGGTGCATGGCCGAATCCCTGCATCCATAGGAAACGTTTCGACTCTGGTTGATCTTGAATTGAGTGGAAATTTTCTAACGGGTCAAATTCCTGCAGAGCTTGGAATGCTGAAAAACTTGCAGCAACTTGAGCTTTACTATAACCAACTTATTGGCAATATACCCAAGGAGCTAGGAAATCTCACGGAACTCAGGGACTTGGACATGTCAGTCAATAAGCTGTCTGGAAGTATCCCAGAATCTATTTGTCGTCTTCCCAGGCTCGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATCCCAGGTGTGATAGCAAACTCGAAAACCTTGAGAATATTATCTCTTTATGACAATTTTTTGACAGGAGAAGTTCCAAGAAATCTGGGTCAGTTCTCAGGAATGGTAGTTCTAGATTTATCCGAGAACAGACTGTCTGGTCCACTGCCAACAGAGGTTTGCAAGGGAGGTAGACTGATGTACTTCCTTGTTCTGAATAATTTTTTTTCGGGAGAGCTACCCGACAGTTATGCAAAGTGCTGGACGATGCTGAGGTTTCGGGTCAGTAATAACCATTTGGTGGGCTCAATTCCCGAGGGGCTCCTTGGCCTCCCGCACGTTTCCATAATTGATTTGAGTAACAATAATTTAAGTGGTCCAATTTCCAAGACTGTTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATTTCAGGAGTTATACCTCCAACCATCTCTCGAGCTACCAATCTGGTCAAGATTGATTTCAGCAACAACCTTTTGTCCGGTCCAATACCTTTCGAAATTGGTAACCTTAAAAGGCTTAACTTGCTGATGTTGCAAGGGAATAAGCTAAATTCTTCCATCCCTGGCTCACTTTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGTTTCTCTGATCTGCTACCGAACTCTATCAATTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTCCATCGTTGATAAAAGGAGGTTTAGTCGAAAGTTTCTCAGGGAATCCTGGTCTGTGTGTGTCACCCGTCTATGCTAACTCATCGGATCGAAATTTTCCCATATGTTCAAAGACTAGCAGCAAGAAGAGACTAAGCACTTTCTGGGTAGCAGGGATTTCAGTGGTTTTGATCATAACTGGAGCAACCTTGTTTTTGAAACGTAGGTGTAGCAAAGAGAGAGCTGCAGTGGAACATGACGAAACACTGTCTTCGTCATTCTTCTCTTATGAAGTGAAGAGCTTTCACAGGATAACAATTGACCAACGGGAGATTGTCGAGGCCATGGTCGATAAGAATATAGTGGGACGTGGAGGGTCTGGGACAGTCTACAAGATCGAGTTGAAAAGCGGAGAATTTGTTGCTGTGAAGCGGCTATGGAGTCGAAAGTCGAAGGATTCGGTTCCAGATCAGGATAGTTTAGCTTTGGACAAGGCATTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGACACAAGAACATAGTCAAACTGTACTGCTGCTTCTCGAGCTTGGATTGCAGCTTGTTAGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATGCTCTACACAAAGGTTCGGTCCATTTGGATTGGCCTACTCGCCATAAGATTGCACTGGGGACAGCGCAGGGCGTGGCATACCTCCACCATGATTTGCTCCCTCCTATAATTCATAGAGACATCAAGTCAACTAACATCCTTCTCGATGTTGATTACCAACCCAAGGTCGCAGATTTCGGGATTGCCAAGGTATTGCAGGCAAGAGGAGGGAAGGACTCCACATCTACTGTTATTGCAGGCACATATGGTTACTTGGCACCTGAATATGCTTATTCTTCCAGAGCATCTGTCAAGTGTGATGTCTATAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAACATCGTTTATTGGGTTTCAAACAAAGTGGACAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCGATTGGACGGGTCTTACAAAGAGGAAATGATTCAGGTGCTCCGAATTGCCATCCGCTGCACCTATAAGGCTCAAGCTCTTCGACCGACCATGAAAGAGGTAGTTCAAGTGCTAATTAAGGCAGACCCGTCAAGCAAGTTATCCAATAAGACCAAAGAAACATCAAATGCCACTTTGACAAAGAACTCAACATTGGAACTGTAG 2871 0.4354 MDRQTIFFLFGLIFSFSLASQAISDGQLQFFYLMEKSLSGKYPLNWDLTEGKPVCNFTGVVCNNQGEVINLDISGWSLSGNFPSDICTYLPELRFLRLSHNRLRGNSLDSIINCSHLEELDMNHVYHTGTLPDFSPMKSLRILDLSYNSFKGQFPMSVFNLTNLEVLNFNENAGFNLWELPEDMHKMKNLKSVILSTCLVHGRIPASIGNVSTLVDLELSGNFLTGQIPAELGMLKNLQQLELYYNQLIGNIPKELGNLTELRDLDMSVNKLSGSIPESICRLPRLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRNLGQFSGMVVLDLSENRLSGPLPTEVCKGGRLMYFLVLNNFFSGELPDSYAKCWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDLSNNNLSGPISKTVGNPRNLSELFIQKNRISGVIPPTISRATNLVKIDFSNNLLSGPIPFEIGNLKRLNLLMLQGNKLNSSIPGSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYANSSDRNFPICSKTSSKKRLSTFWVAGISVVLIITGATLFLKRRCSKERAAVEHDETLSSSFFSYEVKSFHRITIDQREIVEAMVDKNIVGRGGSGTVYKIELKSGEFVAVKRLWSRKSKDSVPDQDSLALDKALKTEVETLGNIRHKNIVKLYCCFSSLDCSLLVYEYMPNGNLWDALHKGSVHLDWPTRHKIALGTAQGVAYLHHDLLPPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTSTVIAGTYGYLAPEYAYSSRASVKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDSKEGASEVLDKRLDGSYKEEMIQVLRIAIRCTYKAQALRPTMKEVVQVLIKADPSSKLSNKTKETSNATLTKNSTLEL 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2485 956 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524
Acco05g2485 956 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Acco05g2485 956 FunFam leucine-rich repeat receptor-like protein kinase TDR 734 939 - -
Acco05g2485 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Acco05g2485 956 PANTHER LEUCINE RICH REPEAT KINASE 2 180 932 - -
Acco05g2485 956 FunFam Leucine-rich repeat receptor-like protein kinase 177 279 - -
Acco05g2485 956 SMART serkin_6 648 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2485 956 FunFam receptor protein-tyrosine kinase CEPR1 631 733 - -
Acco05g2485 956 SMART LRR_typ_2 235 259 IPR003591 -
Acco05g2485 956 SMART LRR_typ_2 475 498 IPR003591 -
Acco05g2485 956 SMART LRR_typ_2 499 522 IPR003591 -
Acco05g2485 956 SMART LRR_typ_2 331 355 IPR003591 -
Acco05g2485 956 SMART LRR_typ_2 90 115 IPR003591 -
Acco05g2485 956 SMART LRR_typ_2 283 306 IPR003591 -
Acco05g2485 956 SMART LRR_typ_2 137 161 IPR003591 -
Acco05g2485 956 SUPERFAMILY L domain-like 283 541 - -
Acco05g2485 956 Gene3D Phosphorylase Kinase; domain 1 631 733 - -
Acco05g2485 956 Gene3D Transferase(Phosphotransferase) domain 1 734 953 - -
Acco05g2485 956 ProSiteProfiles Protein kinase domain profile. 648 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2485 956 SUPERFAMILY RNI-like 68 346 - -
Acco05g2485 956 Pfam Protein kinase domain 650 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2485 956 Gene3D Ribonuclease Inhibitor 28 305 IPR032675 -
Acco05g2485 956 PRINTS Leucine-rich repeat signature 499 512 - -
Acco05g2485 956 PRINTS Leucine-rich repeat signature 334 347 - -
Acco05g2485 956 Gene3D Ribonuclease Inhibitor 306 569 IPR032675 -
Acco05g2485 956 SUPERFAMILY Protein kinase-like (PK-like) 638 927 IPR011009 -
Acco05g2485 956 MobiDBLite consensus disorder prediction 935 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2485 Acco-ChrAcco05 40582576 40586002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2485 24 943 Receptor kinase-like Gene Family AT5G49660 66.058 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco05g2485 Pkinase 3.9e-46 CL0016