Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2466 ATGGCGATTGCAGCAGAGATCCAGCCTCAGCCTCAGCCTCAGCCTCCATCTCATGGCAAGACTTCTTCTGAGGCTTCTGCTGTGGAGAACAGAAGGTGGACCCTCAACGACTTTGATATTGGAAAGCCTCTTGGAAGGGGAAAATTTGGTCATGTCTATTTGGCCAGAGAAAAGAGAAGTAGTCATATTGTTGCTCTGAAAGTCCTCTTCAAGAGCCAATTGCAACAGTCCCAAGTCGAGCATCAACTTAGACGAGAAGTTGAAATCCAAAGTCATCTGCGACATCCCAACATTTTACGCCTTTATGGATACTTTTATGATCAGAAAAGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCAGCTACTTATGTTGCTTCATTGGCTCGAGCCCTCATATATTGCCATGGAAAGCACGTAATACATAGGGATATTAAACCTGAGAACCTTCTTATTGGCGCCCAGGGTGAACTGAAAATTGCAGACTTTGGGTGGTCCGTGCACACATTTAACCGCAGGCGGACCATGTGTGGAACACTAGATTATCTTCCTCCTGAGATGGTGGAGAGCGTAGAACATGATGCAAGCGTTGATATATGGAGTCTTGGTGTCCTGTGTTATGAGTTTCTCTATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGAGACATACAGAAGAATAATCCAAGTGGATCTCAAGTTCCCGCCCAAACCAATTGTGTCCTCTGCTGCAAAGGACCTCATTAGTCAGATGCTGGTGAAGGATTCTTCTAATCGTCTACCATTACACAAGCTTCTGGAACATCCTTGGATAGTTCAGAACGCTGAGCCCTCTGGTGTATACAAGTGCTAG 906 0.4426 MAIAAEIQPQPQPQPPSHGKTSSEASAVENRRWTLNDFDIGKPLGRGKFGHVYLAREKRSSHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSETYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSNRLPLHKLLEHPWIVQNAEPSGVYKC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2466 301 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 8 299 IPR030616 GO:0004672
Acco05g2466 301 SUPERFAMILY Protein kinase-like (PK-like) 18 293 IPR011009 -
Acco05g2466 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Acco05g2466 301 PIRSF ILK 5 286 - -
Acco05g2466 301 Gene3D Transferase(Phosphotransferase) domain 1 122 298 - -
Acco05g2466 301 MobiDBLite consensus disorder prediction 1 26 - -
Acco05g2466 301 Pfam Protein kinase domain 40 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2466 301 Gene3D Phosphorylase Kinase; domain 1 26 121 - -
Acco05g2466 301 ProSiteProfiles Protein kinase domain profile. 38 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2466 301 FunFam serine/threonine-protein kinase Aurora-1 122 297 - -
Acco05g2466 301 FunFam Aurora kinase A 30 121 - -
Acco05g2466 301 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Acco05g2466 301 CDD STKc_Aurora 37 290 - -
Acco05g2466 301 SMART serkin_6 38 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2466 Acco-ChrAcco05 40370406 40372791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2466 29 300 CBL-interacting serine-threonine protein kinases AT5G10930 35.842 5.69e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Acco05g2466 Pkinase 1.7e-73 CL0016