Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2453 ATGCCTGAACTGCGTAGCAGAGCGCGCAGGAACCGGGCATTACATAACCCAACCCCCAATCCGATTACCCAACCCCAAAAGCCCACGGTAAGAACTCGCCAAAGGAGGAGAACCAACGCGCAGAACAGGGAGAATCCGCAGCAGAAGAACACGATCGGTGTTGATGAAAGTAATTGTATTGTGAGTAGGGACATTGGTGCCATTCCTCAAACGAGGACGTTGCGAGATAAGGAAGGAAAAGAACCAGGACAAGCGCCAGACGCAAAGCTTAGGGTTTTGAGAGAGAAAGTTGGGGATAAAGCCATGGATGATTATGACAGTGGCGGTCATAGTCCCGATAAGGCTCTAGCTGCCGATGACGAAGGCTGCACCGCTCCGTTACCTGAGAAGGTCCAGGTCGGTGGTTCACCAACATACAGAATCGATAGAAAATTGGGAAAAGGAGGATTTGGACAAGTCTATGTTGGCAGGCGTGTTGGTGCCACAAATCCCACTGAACTGAGCGGTCCTGGAGCTGTCGAGGTGGCCTTAAAGTTTGAGCATAGAAGTAGTAAAGGCTGCAACTATGGACCGCCATATGAGTGGCAGGTCTACAATGTGTTGGGTGGTAGTCACGGTGTTCCAAGAGTTCATTATAAGGGGAGGCAAGGTGATTATTATATTATGGTAATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATAACAACTCTCATTCGATGTCTATAGACATGGTAGCTTGTATTGCCATTGAGGCAATATCCATATTAGAGAAGATGCATTCTAAAGGCTATGTGCATGGTGATGTAAAACCTGAGAACTTCTTGCTTGGTCCCCCGGGAACTCCTGAAGAGAAGAAGCTGTTTCTTGTCGATCTTGGATTAGCTACCAGATGGCGAGATAATTCAACAGGCTTTCATGTTGAGTATGATCAACGCCCAGATGTATTTAGGGGAACATTACGATATGCTAGTGTGCATGCTCATCTTGGTAGAACTGGCAGCAGAAGAGATGACTTGGAATCTCTTGCTTATACACTGATCTTCCTTCTTCGTGGTCGGCTTCCGTGGCAAGGATATCAGGGAGAAAATAAAGGATTCCTTGTCTGCAAGAAGAAGATGGCCACTTCCCCAGAAACTTTGTGCTGTTTTTGTCCTCTACCCTTTCGACAGTTTGTTGAGTATGTTGTGAATTTGAAGTTTGATGAAGAACCAAACTATGCAAAGTATATCTCCCTTTTTGATGGAATTGTTGGTCCGAATCCTGACATCAGGCCAATAAATACAGAGGGTGCTCAGAAGCTTATATTTCAGGTTGGTCATAAGAGAGGACGATTAACCATAGAAGATGATGATGATGAACAACCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACTCAATGGATCAGTGTCTATAATGCTCGTCGACCAATGAAGCAAAGGTATCATTACAATGTGGCAGATATGCGCTTGTCCCAACACATTGAGAAAGGAAATGAGGATGGGTTATTTATAAGTAGTGTGGCTTCTTGTTCCAATCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCTCTTCACAAGTTTATGAGCTCTCACCCTATTTTCTTCATAAGGAATGGATTATGGAGCAATGGGAAAAAAATTATTACATCAGTGCTATAGCAGGGGCTAGTAATGGAAGCTCACTTGTTGTGATGTCTAAAGGGACCCAGTACTTGCAGCAGTCCTATAAAGTCAGTGATTCATTCCCATTCAAGTGGATTAATAAAAAATGGAGAGAGGGCTTTTATGTCACTGCCATGGCAACTGCTGGAAGTAGATGGGCAATTGTCATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAACTTGATTTCCTGTATCCCAGTGAAGGTATTCATCGGAGGTGGGATCAATGTTACCGTATCACATCCACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTTAGTATCCCGAGGAGAAAACCAGTTGATGAGACTCAAGAGACGCTTCGTACCTCTACTTTCCCTAGTACCCATGTCAAGGAAAAGTGGGCCAAGAACTTGTATATAGCATCCATTTGTTATGGGAGAACAGTTTCATGA 2121 0.4479 MPELRSRARRNRALHNPTPNPITQPQKPTVRTRQRRRTNAQNRENPQQKNTIGVDESNCIVSRDIGAIPQTRTLRDKEGKEPGQAPDAKLRVLREKVGDKAMDDYDSGGHSPDKALAADDEGCTAPLPEKVQVGGSPTYRIDRKLGKGGFGQVYVGRRVGATNPTELSGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHSMSIDMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPEEKKLFLVDLGLATRWRDNSTGFHVEYDQRPDVFRGTLRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPLPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIFQVGHKRGRLTIEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFSSQVYELSPYFLHKEWIMEQWEKNYYISAIAGASNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDQCYRITSTAATWDQAAFVLSIPRRKPVDETQETLRTSTFPSTHVKEKWAKNLYIASICYGRTVS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2453 706 ProSitePatterns Protein kinases ATP-binding region signature. 145 178 IPR017441 GO:0005524
Acco05g2453 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Acco05g2453 706 ProSiteProfiles Protein kinase domain profile. 139 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2453 706 SMART serkin_6 139 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2453 706 FunFam casein kinase 1-like protein HD16 112 462 - -
Acco05g2453 706 SUPERFAMILY Protein kinase-like (PK-like) 138 419 IPR011009 -
Acco05g2453 706 MobiDBLite consensus disorder prediction 1 56 - -
Acco05g2453 706 Pfam Protein kinase domain 139 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2453 706 Gene3D Transferase(Phosphotransferase) domain 1 113 455 - -
Acco05g2453 706 CDD STKc_CK1 139 415 - -
Acco05g2453 706 PANTHER CASEIN KINASE-RELATED 133 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2453 Acco-ChrAcco05 40277541 40281640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2453 100 373 AGC Kinase Gene Family AT3G08730 24.820 1.00e-07 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Acco05g2453 Pkinase 3.5e-15 CL0016