Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2450 ATGTGCACAGCTTGGGATCCGAGGACTGATTCACACGAGAGGAATCAGAGTTGTGCACTCCATCCAGTAGTGATAAACATGGCTCGAACTGAATCAAAGTGTTGCTTCACGTGTATGTTTGTCCTCCTCATGTTGACGATGACGATGAACTATGTGGCGTCCCATGAAAAACAAGAAGAAGAGCTTCTATTATCGTTCAAGACTTCCATTAACGACCCACTTAACCATCTCTCAGACTGGGTCGTCACTTCCTCTTCCTCCAGTATCTGCCACTGGAACGGTGTCGCCTGCGACACTAACTCCCATGTTCGCGTCGTCAACCTCTCCGGCAAGAACATATCCTCCTATAATATTTCCTCCTCCATATTTCAACTTCCACACGCTGAACACATTGACCTCTCCGACAATCGGCTCTCCGGGGAAATCTCTTTCTCTCTCTCTTCCCTTCTCTATCTCAATCTTAGCAACAACAACTTCACGGGTCCTGTCCCATTATCATTTTCCCGCATCCAAATTCTGGATCTTTCCAACAACATGTTTTCCGGGGAAATACCCCACCAATTTGGATCACTCGCGAGTCTGAGGTACGTTGATCTGGGAGGGAACCTTCTGGTGGGAAAGATTCCTGATTCTGTCACTAACATGACAGGTTTAGAGTACTTGACCTTGGCTTCTAACCAGCTCGTGGGTGAAATCCCTCCAAAAATTGGCCTCATGAAGCGCTTAAAGTGGATTTATCTCGGGTACAATAATCTCTCGGGTGAGATTCCAGGGAGAATCGGAGAACTGAAGAATTTGAATCATCTTGATCTTGTTTACAACAACCTCACGGGACACATTCCCGATTCTCTTGGGAACCTCACTAATCTTGAGTATCTTTTTCTCTACCAAAACAAGCTGACAGGTCGAATTCCATGGTCAATATTTGAGCTTAGAAAGCTTTTATCACTTGATCTCAGTGACAATTTTCTGTCTGGTGAGATTCCAGAGCTCGTAATTCAGCTTCAGAGACTTGAAATTCTCCACCTTTTCTGCAACAACTTTACCGGCAAGATTCCAAACGCTATGACCTCTCTGCCTCGCCTCCAAGTTCTTCAGCTATGGTCTAACGGATTAACGGGTGAGATCCCAGAGGATTTGGGAAAGCACAGCAACCTCACTGTTCTGGATCTTTCCACCAACAAACTTTCTGGGAAAATTCCAGATAGTTTATGTCACTCTGGCGCTCTTTACAAGCTTATCCTTTTCTCCAACTCTCTTCAAGGGGAATTACCAAGCAGCTTAACCTCTTGCAAAAGCTTGCGCCGAGTTCGCCTTCAGAACAATAAGTTTTCCGGTGAACTACCGTCCCGACTAACTCAACTGCCACAGGTGTATTTATTGGACATCTCCGGTAATCAACTCTCCGGCAGGATTGATGATAGGAAATGGAATATGTTGTCGCTTCAAATGTTGAATTTGGGTAACAACAATTTCTCCGGTGAGTTACCAACCACTTTTGGTAGTACAAAATTGGAGAAACTGGACTTATCCGAAAATCGATTTTCTGGTAATATTCCACGTGGGCTTGGAAGCTTATCGGAGCTGATACAATTGAATCTGAGCAATAACAAACTATGTGGTGAAATCCCACAAGAACTCACTTCCTGCAGGAAGCTAGTGCTTTTAGATATCAGCCACAATCAACTCACTGGTCAAATTCCAACGAGTCTCGGTGACATGCCGGTTCTGAGCTTGCTGGATGTATCAGATAACCAATTTTGGGGTAAAATCCCAGAGAATTTAGGCAGGGTAGAATCTCTAGTGCAGCTAAACATATCCCACAACCATTTTCACGGACATTTACCGGCCACCGGAGCTTTCCTCGCCATTAATGCCAGCGCCGTCACTGGCAACGACCTATGTGGTGGTTCCGGTGGGTTGCCGCCATGCAAAAAAGGCGATAAGAATCCATGGTTTGTCGTACTCTGGTTCGCAGTGGGATTTGCAGGGTTTGCATTAGCGGCCTTTCTAGTTACTTGTTCGCATAGAAGAAACAGTTTGGAGCTCAAGAGAGTGGAAAACGAAGATGGTACGTGGGAGATTCAGTTTTTCGATTCCAAGTTTGAAAAATCGATAACAATGAACGATATTTTATCGTCAGCAAAAGCAGGACATGTGATCTCCAAAGGGAAGAACTGGGTTTCATACGAAGGGAAGTGCATTGCAAGTGGCATGCAATTCGAGGTGAAGGAAATCAGAGACTTAAATTCAGCTCCGTTGGGTTTCTGGGAAGACTTGACGGAATTGGGTAAGGTCCGGCATCCAAATATTTTTAAACTGATGGGACTATGTCGTTCAGGAAAAGGAGCATTTTTGCTGTATGAGGATGCCGAAGGAAAGAGTTTAAGTCAAGTTGTGAAGAATTTGAGCTGGGAAAGTCGACGGAAAATCACCGTCGGCGTTGCAAAAGCACTAAAGTTTCTGCATGCTCAATGCTCATCAGTTATTTTGGTCGGTGACATGTCACCGGAAAGCATTATCGTCGACGGCAACGACATTCCACGCTTGAAGTTGAGCCCTCCGGCATTGCTTAAGGTCTCCATTTCTTCTCCTTACGTTGCCCCAGAAGTGAAGAACGGGAAGGAGGTGACAGAGAAGAGCGACGTGTATGGATTTGGTGTGATTCTGATAGAACTGTTGACCGGAAGGAGGGGAGTGGGAACGGAGGAGGAGGGGAGCATGGTGGAGTGGGCCCGATTCTGCTATTCGGACTGTCATTGGGAAACGTGGGTCGACCCGACAATGAAAGGTGGAAAACAGAACGACGTCGTAGCGGCCATGAACCTGGCACTGCACTGCACCGCCATGGATCCCACAGCAAGGCCATGCGCAAGCGTCATCTTCAAAGCACTCTCTGCTGTCACCTGCACGCACTCTGTCCTCTGTGGCTCTGCCCTCCAACCATGA 2949 0.4639 MCTAWDPRTDSHERNQSCALHPVVINMARTESKCCFTCMFVLLMLTMTMNYVASHEKQEEELLLSFKTSINDPLNHLSDWVVTSSSSSICHWNGVACDTNSHVRVVNLSGKNISSYNISSSIFQLPHAEHIDLSDNRLSGEISFSLSSLLYLNLSNNNFTGPVPLSFSRIQILDLSNNMFSGEIPHQFGSLASLRYVDLGGNLLVGKIPDSVTNMTGLEYLTLASNQLVGEIPPKIGLMKRLKWIYLGYNNLSGEIPGRIGELKNLNHLDLVYNNLTGHIPDSLGNLTNLEYLFLYQNKLTGRIPWSIFELRKLLSLDLSDNFLSGEIPELVIQLQRLEILHLFCNNFTGKIPNAMTSLPRLQVLQLWSNGLTGEIPEDLGKHSNLTVLDLSTNKLSGKIPDSLCHSGALYKLILFSNSLQGELPSSLTSCKSLRRVRLQNNKFSGELPSRLTQLPQVYLLDISGNQLSGRIDDRKWNMLSLQMLNLGNNNFSGELPTTFGSTKLEKLDLSENRFSGNIPRGLGSLSELIQLNLSNNKLCGEIPQELTSCRKLVLLDISHNQLTGQIPTSLGDMPVLSLLDVSDNQFWGKIPENLGRVESLVQLNISHNHFHGHLPATGAFLAINASAVTGNDLCGGSGGLPPCKKGDKNPWFVVLWFAVGFAGFALAAFLVTCSHRRNSLELKRVENEDGTWEIQFFDSKFEKSITMNDILSSAKAGHVISKGKNWVSYEGKCIASGMQFEVKEIRDLNSAPLGFWEDLTELGKVRHPNIFKLMGLCRSGKGAFLLYEDAEGKSLSQVVKNLSWESRRKITVGVAKALKFLHAQCSSVILVGDMSPESIIVDGNDIPRLKLSPPALLKVSISSPYVAPEVKNGKEVTEKSDVYGFGVILIELLTGRRGVGTEEEGSMVEWARFCYSDCHWETWVDPTMKGGKQNDVVAAMNLALHCTAMDPTARPCASVIFKALSAVTCTHSVLCGSALQP 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2450 982 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 164 256 - -
Acco05g2450 982 FunFam Leucine-rich repeat receptor protein kinase EMS1 257 343 - -
Acco05g2450 982 SUPERFAMILY L domain-like 251 616 - -
Acco05g2450 982 Gene3D Transferase(Phosphotransferase) domain 1 792 974 - -
Acco05g2450 982 SUPERFAMILY L domain-like 409 516 - -
Acco05g2450 982 ProSiteProfiles Protein kinase domain profile. 715 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2450 982 Pfam Leucine rich repeat N-terminal domain 57 98 IPR013210 -
Acco05g2450 982 Pfam Leucine rich repeat 360 420 IPR001611 GO:0005515
Acco05g2450 982 Pfam Leucine rich repeat 241 300 IPR001611 GO:0005515
Acco05g2450 982 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Acco05g2450 982 Pfam Leucine rich repeat 504 563 IPR001611 GO:0005515
Acco05g2450 982 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 679 790 - -
Acco05g2450 982 Gene3D Phosphorylase Kinase; domain 1 679 789 - -
Acco05g2450 982 Gene3D Ribonuclease Inhibitor 169 257 IPR032675 -
Acco05g2450 982 SUPERFAMILY Protein kinase-like (PK-like) 710 965 IPR011009 -
Acco05g2450 982 SMART LRR_typ_2 311 335 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 146 169 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 215 239 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 359 383 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 263 287 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 384 407 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 526 550 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 574 598 IPR003591 -
Acco05g2450 982 SMART LRR_typ_2 479 502 IPR003591 -
Acco05g2450 982 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 344 640 - -
Acco05g2450 982 ProSiteProfiles Leucine-rich repeat profile. 385 407 IPR001611 GO:0005515
Acco05g2450 982 Gene3D Ribonuclease Inhibitor 336 648 IPR032675 -
Acco05g2450 982 SUPERFAMILY RNI-like 90 329 - -
Acco05g2450 982 Gene3D Ribonuclease Inhibitor 58 168 IPR032675 -
Acco05g2450 982 Pfam Protein kinase domain 730 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2450 982 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 410 966 - -
Acco05g2450 982 Gene3D Ribonuclease Inhibitor 258 335 IPR032675 -
Acco05g2450 982 PRINTS Leucine-rich repeat signature 386 399 - -
Acco05g2450 982 PRINTS Leucine-rich repeat signature 526 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2450 Acco-ChrAcco05 40224704 40228009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2450 37 965 Receptor kinase-like Gene Family AT2G25790 52.521 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Acco05g2450 Pkinase 9.8e-17 CL0016