Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2449 ATGATGGCGGTGAGCTCGTCTAGCAAAGATGGGAGCAAGGTGGCGATGGATAACGGCAAGTACGTGCGTTACACACCGGAGCAGGTGGAGGCTCTGGAGAGGCTCTATCACGAATGCCCCAAACCCAGTTCCATGCGCCGTCAGCAGATTATCCGAGAGTGTCCCATTCTCTCTAACATCGAGCCCAAACAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGCGAAAAGAAGCTTCACGCCTGCAAGGTGTAAACAGAAAACTGACGGCTATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAACAGGTGTCCCAGCTGGTTTACGAGAACAGCTTTTTCCGCCAACATCAGAATACGACTCTGGCAACGACGGACACAAGTTGCGAGTCGGTAGTGACAAGCGGTCAGCACCATGTGACACCTCAGCATCCACCAAGGGATGCAAGCCCAGCTGGACTTTTGTCCATTGCAGAGGAGACTCTTGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGAGTGGCAGCCCGCGCATGCGGCCTTGTGGGTTTGGAACCGACAAGGGTTGCCGAAATCCTCAAAGATCGGCCCTCATGGTGTCGTGACTGCCGAGCTGTGGACGTTCTTAATGCGATGACCACAGGAAATGGAGGAACCGTTGAATTGCTTTACATGCAGTTGTATGCCCCAACAACTTTGGCTCCAGCTCGTGACTTCTGGCTGCTGCGTTACACTTCTGTTTTGGAGGATGGTAGTCTTGTGGTCTGTGAAAGATCACTTAACAACACTCAGAATGGTCCTACTATGCCACCAGCGCAGCATTTTGTGAGAGCAGACATGCTCCCAAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATCATTCATATTGTTGATCACCTCAACTTAGAGCCTTGGAGTGTACCTGAAGTGTTACGCCCACTCTATGAGTCTTCAACGTTGTTTGCTCAAAAGACAGCCATGGCGGCTTTACGTCACCTGAGGCAAATCTCTCAAGAAGTTTCTCAGCCAAATGTCACCGGATGGGGAAGAAGGCCTGCAGCTTTGCGAGCACTGAGTCAGCGTTTGAGCAGGGGCTTCAACGAAGCTGTCAATGGATTTGCAGACGATGGCTGGTCCATGTTGGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAATTCATCTCCTAGCAAGACCATGGGAGTAAATATTGGTTATAGCAATGGGTTTCTTTCGATGAGCAGTTCCGTGCTATGTGCAAAAGCATCCATGTTGTTACAGAATGTCCCTCCTGCAATTCTTCTTAGATTCTTGCGGGAGCATCGATCAGAGTGGGCAGATAGCAATATTGATGCTTACTCAGCCGCTGCCATCAAAGCTGGTCCATGTACCTTGCCTGGGGTTCGAGCAGGAGGTTTTGGTGGTCAGGTTATTCTTCCACTGGCGCACACAATTGAGAATGAAGAGTTTATGGAGGTCATCAAGCTTGAAAATATGGGTTACTATAGAGAAGACATGACTATTCCGGGCGATATTTTCCTCTTGCAACTTTGTAGTGGAGTAGATGAGCGTGCCGTTGGCACCTGTGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCTCTGATGATGCTCCCATTTTACCTTCCGGTTTTCGCATCATACCTCTTGATTCAGGATTGGATGCTGCTACTCCAAACCGAACACTTGATCTTGCTTCTGCTCTTGATGTTGGAACCACTGGAAACAAATCAGCTGGCGATAATGTTGGTCAATCTGGGAGCACAAAATCTGTGATGACAATAGCATTTCAGTTTGCATTTGAAGTCCATCTTCAAGATAGTGTAGCAGCTATGGCTAGGCAGTATGTTCGGAGTATTATTGCATCTGTTCAAAGGGTAGCATTGGCACTATCCCCTTCCCACTTTGGTTCCCAAAACGGTCTTCGCCCTCCACCTGGCACTCCTGAGGCACAAACACTTGCTCAGTGGATCTGTAATAGCCATAGGAGCTATCTAGGGGTAGAACTACTAAAATGTGAAGGCAGTGAATCTATTCTCAATGCCCTTTGGCAGCACTCTGATGCAGTCTTGTGCTGCTCTTTAAAGGCTTTGCCGGTTTTTACATTTGCAAATCAAGCGGGACTTGACATGCTTGAGACAACTTTGGTTGCTCTTCAAGACATCACTCTTGATAAAATTTTCGACGAGAATGGGAAGAAAACCCTGTTCTCTGAGTTGCCCCAGATAATACAGCAGGGCTTTATGTGTATGCAAGGAGGTATCTGCTTGTCCAGCATGGGGAGGCCAGTGTCTTACGAAAGAGCGGTTGCATGGAAAGTAATGAACGAAGAAGAAACGGCCCATTGCATTTGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2517 0.4807 MMAVSSSSKDGSKVAMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQIIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQGVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQHQNTTLATTDTSCESVVTSGQHHVTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWCRDCRAVDVLNAMTTGNGGTVELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTMPPAQHFVRADMLPSGYLIRPCEGGGSIIHIVDHLNLEPWSVPEVLRPLYESSTLFAQKTAMAALRHLRQISQEVSQPNVTGWGRRPAALRALSQRLSRGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKTMGVNIGYSNGFLSMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSNIDAYSAAAIKAGPCTLPGVRAGGFGGQVILPLAHTIENEEFMEVIKLENMGYYREDMTIPGDIFLLQLCSGVDERAVGTCAELIFAPIDASFSDDAPILPSGFRIIPLDSGLDAATPNRTLDLASALDVGTTGNKSAGDNVGQSGSTKSVMTIAFQFAFEVHLQDSVAAMARQYVRSIIASVQRVALALSPSHFGSQNGLRPPPGTPEAQTLAQWICNSHRSYLGVELLKCEGSESILNALWQHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLDKIFDENGKKTLFSELPQIIQQGFMCMQGGICLSSMGRPVSYERAVAWKVMNEEETAHCICFMFINWSFV 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2449 838 CDD bZIP 72 111 - -
Acco05g2449 838 SUPERFAMILY Homeodomain-like 19 82 IPR009057 -
Acco05g2449 838 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Acco05g2449 838 CDD START_ArGLABRA2_like 157 372 - -
Acco05g2449 838 SMART HOX_1 17 83 IPR001356 GO:0003677
Acco05g2449 838 Pfam START domain 163 371 IPR002913 GO:0008289
Acco05g2449 838 SUPERFAMILY Bet v1-like 162 374 - -
Acco05g2449 838 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Acco05g2449 838 Gene3D - 11 85 - -
Acco05g2449 838 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Acco05g2449 838 FunFam Homeobox-leucine zipper protein REVOLUTA 20 75 - -
Acco05g2449 838 Coils Coil 89 116 - -
Acco05g2449 838 CDD homeodomain 20 80 IPR001356 GO:0003677
Acco05g2449 838 SMART START_1 162 372 IPR002913 GO:0008289
Acco05g2449 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 16 838 IPR044830 GO:0003700
Acco05g2449 838 Gene3D - 197 379 IPR023393 -
Acco05g2449 838 Pfam MEKHLA domain 697 837 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2449 Acco-ChrAcco05 40211743 40218025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2449 16 838 Homeobox Transcription Factor Family AT4G32880 81.039 0.0 1409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco05g2449 START 3.7e-53 CL0209