Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2443 ATGAGTGTTGTTGAACCTCAGAATTCTGAAGCAGAAAGCAGCTCAAACTCATTCTCCTCTCCACCCACTTCACCATCATCGCCTCCTTCAATCAGGGGCGCTCTTAAAACCTCTGTCACGCAGGGGAAATCTCAGGACCCAGAATCCAAAAAGATAAAACGCATTCGAGACTCCAATAAACATCCTGTGTATCGAGGGGTTCGTATGCGCAGTTGGGGCAAATGGGTGTCTGAAATTCGCGAGCCGCGCAAGAAATCTCGCATATGGCTGGGTACATTCTCAAACCCTGAAATGGCCGCCAGGGCACACGACGTCGCTGCTCTGAGCATCAAAGGGAACTCTGCCATTCTCAATTTCCCTCAACTAGCAAACTCTCTGCCCCGCCCTGCCTCTGTCTCTCCCCGTGATATTCAGGCCGCCGCAGCAAAAGCCGCTCAAATGGATCAGTTTGACTCACCGTCGTCGTCGTCTTCGGTTTCGACAATGGAAATGTGCAGTGGTTCTGAGGAATTGAGCGAGATCATAGAGCTGCCAAGGCTGGAAACAAGTGAAGAGACGTGCGAGTTTAGGAAGGAATTTGTGTTCGTGGACTCTTTATCTGACGGGTGGATGTATCAGCCACCATGGTTACAGAGCATGGAAGATTGCAATGGTTACGTCGCTGATCAGCTAGCAGAGGGTGGAATCATAAATAATCTTGATAGTTTGCTCTGGAATTACTGA 723 0.4952 MSVVEPQNSEAESSSNSFSSPPTSPSSPPSIRGALKTSVTQGKSQDPESKKIKRIRDSNKHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFSNPEMAARAHDVAALSIKGNSAILNFPQLANSLPRPASVSPRDIQAAAAKAAQMDQFDSPSSSSSVSTMEMCSGSEELSEIIELPRLETSEETCEFRKEFVFVDSLSDGWMYQPPWLQSMEDCNGYVADQLAEGGIINNLDSLLWNY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2443 240 MobiDBLite consensus disorder prediction 29 45 - -
Acco05g2443 240 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Acco05g2443 240 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Acco05g2443 240 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Acco05g2443 240 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Acco05g2443 240 MobiDBLite consensus disorder prediction 1 61 - -
Acco05g2443 240 MobiDBLite consensus disorder prediction 1 21 - -
Acco05g2443 240 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Acco05g2443 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 33 187 - -
Acco05g2443 240 CDD AP2 64 120 IPR001471 GO:0003700|GO:0006355
Acco05g2443 240 MobiDBLite consensus disorder prediction 46 61 - -
Acco05g2443 240 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Acco05g2443 240 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Acco05g2443 240 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2443 Acco-ChrAcco05 40144075 40144797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2443 38 219 AP2-EREBP Transcription Factor Family AT5G11590 57.789 1.13e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco05g2443 AP2 6.1e-13 CL0081