Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2418 ATGGAAGGTGGCAGGACAACGCCTGCTTCATCTGACGGGCTCGGTGATTGTGCCCAGAAAATAAGAGCACTGCATGGGCGGACTACTGGCCCTACAAGGCGTTCTACTAAAGGACAGTGGACGCCTGAAGAGGATGAGATTTTGCGGACGGCTGTTCAGCGTTTTAAAGGGAAGAACTGGAAAAAAATAGCGGAGTGCTTTAAGGATAGAACAGATGTACAATGCTTACATAGGTGGCAAAAAGTCTTAAATCCTGAACTGGTCAAGGGTCCATGGTCAAAAGAGGAAGATGAAATAATAATTGATTTAGTGAATAAATATGGGCCAAAAAAGTGGTCGACCATCTCACAGCACCTACCTGGACGCATCGGTAAACAATGCCGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAGGAAGCGTGGACCTATGAAGAGGAGCTGGCTCTAGTACGTGCTCATCAGATTTATGGGAACAGATGGGCAGAATTGACAAAGTTCTTACCTGGAAGGACGGACAATGCTATTAAAAATCACTGGAACAGTTCAGTAAAAAAGAAATTGGATTCCTACTTGGCATCAGGTTTGCTTACTCAATTCCAAGATGTACCCCTCGTTGGACATCCAAATCAACCTGTGGTTTCTACCTCTTCGAGGCGGCAGTGTAGTGGAGATGATAATGGTTATCAGGGCACTGAAGGAGAGGAAGTTTCTGAGTGTAGCCAGGAGTCAGCTAATGTTAGTTGCTTCCCATCTGCTAGAGATATGACCAATGTTGTATTAAACACTTCAGAGGAACTAAGGCCAAATGAAGATATCAGTGTGGGAAAGGAGCACAGTTCTAGTCAAGCATCCTGTCTAGAGCCGTATTGCATATCTCTGGATGACGTTGCGATATCTATTCCGGACGTTGCACATGAAGATCCTTCTTGTGCAGATTTCATTGAGCAAACATACTCACATGATCCTGGAAATTCTGCAAGCAGGGATAGTCAGTTTACCTTTCACGCCGTCCCTAATATTTGTTCATCAGACTTGGATCAAGAATGTTCACTTCTGCGAAGGGACAGTGCAGATTGCGTTGAAAGCCATGGCATTTTAAGTGTTCCATTGCATACTTTAGTGGGATCAGGTATTTCAACATCCATGGGACCCCCATCTATAGATCCTGCGAAACAAGACCACATGTTAATATCTAGTGAAGAATGTTATAGGGTCCTATATTCAGAGGCAATAAATGATGGATGCTTTTCTTCAGGTGATTATAACCAAAATGTTAATCCAGTTTCATACGGATGCATTTCATTATTTGGTCAATCATCTGACTTCCATATACCTGAGACCGGCGGAACCTCAACTTCATTCCAAACTTGCCCCGTAAAATCTAATCATTTAATAGGATCTTCATGCTCTCAATCTCCAGTCCTTTCTGATGATGACGGTAGATTAGTGTATACAGCTGAAGCCAATAATCCATTTGGAGCTGATGATCTGCAATTTGTCTCCAGAGCTCAGGATAGCTTTATTTATGCTAACAACTCATCCGTTGCTCCTTGTACGGAGGCTATAGATAGTGGAGGAATGCACGAGGAACAAGATACTGTGAAGGATGCTTCAAAATTGGTGCCTGTAAATACATTTGGCTTCTCATCAGATGCCAAGCCTACTTGTCGTCCAATGGAAGAAAGGAGAGATGTGTATATAGAACAGTTGGAGATTGGAGCTCTATGTTATGAACCGCCTCGATTCCCAATTTTGGATATTCCCTTCTTAAGCTGTGATCTTATACAATCAGGAGGGGATATGCAACAAGAATTTAGTCCACTGGGTATCCGCCGGCTTATGATGTCATCTATGAATTGCCCAACTCCCCTGAGGCTGTGGGATTCACCTTCTCGTGATAATAGCCCAGATGCTTTGTTGAGAAGTGCTGCTAAAAGTTTCACTGGTACACCATCCATATTGAAGAAACGACACCGAGACTTGTTGTCGCCTCTATCGGACAAGAGAGCTGACAAGAAACTCGAAACTGACTTGACGTCCACGTTGGCTACACATTTTTCACGTTTGGAAGTCATGTTTGATGATAATGAGACTCGGGAAGTAGGTATGCTTTCTCAACCTTTAATGGATAAAGACAAATCTGGAGCACCTGTTGAGGATACCAAAAATTGTGGACAATCTTTGAAAGGAGAATATGAAGAGGGAAGAAATCAATGTACACTTGGTAACAAAAAGTCAGAAAAAGAGACAGCTGACGGCGATCCTCAAGATTTCCAACGACCTCACAATGATTCGAAGATGAAGGTTGATGTTGATGTTGATGTTGATAAAGCTGCTGAGATTGTGCAACAACCGTCTGGAGTCTTAACTGAGCATGATATGAATGACTTGCTATTATATTCTCCCAATCAAATGTGTTTTAAACCAGACAGAACTCATTGTTCAAGTGCTAGAACTCCAAAAAGTTTGAACTACAGAAATTTGGAAGCAACTTTAGATAAGAGTATTTCTTCAAATCCATGCTCAAGTGATAGATCCCCTTCTGTTCGTGTAAAAAATCACGACGTTTCTTCATTTCCAGTTACTTGTGTATCATCTCTTTGTTCATCAGCGCCTGCCGAGAATATTGGTGATCATCCTGGAAATGATGCTGGTTTTGACGCATTTAGCATATTTGGCGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCTCCCTGGTTCATGAACACTTTCTTGTCTAGCCCCAGACTTGATACTGAAATAACTATCGAGGATTTTGGGTATTTCATGAGCCCAGGCGATAGGAGCTATGATGCGATTGGGTTGATAAAACAGGTGAAGGAACAAACTGCGGCTGCGTATGCTAATGCTCAGGAGATTTTGGACAGTGTAACTCCCAAAGCAAAAGATTCATCTGAAAATGTCAGGGACGCAGACCAGGAAAAGGATAAGCTTGATCATCCCGTGAATGCTTTGGTAGAGCGACGCATACTTGATTTCAGTGAGTGTAAAACGCCAGGGAAGGAGGGCAACGGCAAAGGCTCTGCTCAGACCTTCTCAAGCCCTTCGTCATATTTGTTGAAGGGATGTGCGTCGGTGGTTATAGCCATAAATGAACTAAATTTGGCTTTTGGTGGTGGCTTGGGTGTTGGAATGAAAGGGGAACAAGTGTCAATATCCACACCGTCCATACGCTTAAGTGTTCGACCTTTAACCATAGGGTTTGAAACATCTGAATCCGCCCCTTTATGTTTGAACTTTGAATGGAGAGAGCTCCGGATCGTCTTACTCACCCTCAACTTTACTTATCGTTCATCATTTGTAGATCTTCCTTACAACTCACTGGATCTACAAATGCACACCATTTCGGTCGTTTCACTGTTTATATGTCGTTCTGGCATCTTATCTGAAGCTCAGTCCGGGAATGTGGCTCTGGATACTGACTTGTGGCGAACTAGTGGCCCTACAAGGCGTTCTACAAAAGGACAGTGGACTCCTGAAGAGGACGAGATCTTGCAGAAGGCAGTTCAACGTTTTAAAGGAAAGAATTGGAAGAAAATAGCTGAGTGTTTCAAGGATAGAACAGATGTTCAGTGTCTACACAGGTGGCAGAAAGTCTTAAACCCTGAGCTGGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATTGATTTGGTGAACAAATATGGGCCAAAAAAATGGTCTACTATTGCACAGCACTTACCTGGACGAATTGGTAAGCAATGTCGAGAAAGGTGGCACAATCATCTCAATCCTGGTATAAACAAAGAAGCATGGACCCAAGAGGAAGAGTTGGCTCTAATACGTGCGCATCAAATTTATGGGAACAGATGGGCCGAATTGACGAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCTGTAAAAAAAAAAATGGATTCTTACTTGGCGTCGGGTTTGCTTATACCCCATGTTGGACATCCAAATCAACCCGTGGTTTCCACATCTTCGAGGTTACTTTATAGTGGAGATGATAGTGGTCAGAAGGGAATCGGAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCTGCTAGTGCTGGTCGTCTACCGGTTTCCCGAGAAATGACAAGGGCTGTTTTACATGCTAGAGAAGAAACCAAGCAAAATGAATATTCTAGTATAGGAAAGGAGCAAAGTCCTAGTCAAGCATCATGCTCAGAGCCATATTATATGCCACTGGATGAGGTTACCATATCCAACTCAGACATTGCTCGTGAAGAGGCTTCCTCTTCTCGATTCATTGAGCAAAAATACTCGCAAGAACCTGGAAATTCTGCAGGCATGGACAATGGATTCCAATTACATGGTTTACCCTGTATTTCTTCATTAGACTTGGGTCAGGAATTCTCGCTTTTGCAAGAAGATTGTATAGTTTCTGACGAAAACCGTGACATAGTGAATGCTCAATTTCATACTTCAGCGGGGCTAGGTATTGCAACATCTATGGCTCCCACATCTATGGATTCTTCTAAACCTGAGGACGTGTTGATGGCAGACGAAGAATGTTGTAGATTTCTATTTTCAGATGCAATGAATGATGGAACCTTTTCAACTGGAGATCATAACAAAGGTGTTGATATGGTTTTGCCTGCACGCACTTCAAATCTTTTTCAATCATCTGAGATCCAGATATCGGATGCTGATAGAACCTCGGCTGCACTCAAAACTTGTCCAACAAGATCTGATAATTTAATAGAACCTTCATGCTGCCAATCTTTCCCAATTGTTCCTTCATCGCTTTTAGTCAATGATGGTAGAGTATTGTACACTGCTGAAGCCGCCCGGATGTATGGAGGTGATAATCAGCACTTTGCCTCCAACGCACATGACAGCTTCATTCACCCCAACGACTCATCCATCTCACCTTGCATTGATATTATAGATAGTGCTGAAATGCACGATGGAACCAATATTGTGAATGATGCTTTAAGATTGGTCCCTGTAAATAATTTTACTTGTGCATCGGATGCCAAGCAAACTTGTAATCCAATGGATGAAAAGGCAGATGTACAAACAGAACAGGAGGACACAGGATCTCTATGCTATGAACCTCCTCGATTTCCAAGTTTGGATATTCCTTTCTTTAGCTGTGATCTTATTCAAAGTGGAGGGGATATGCAGCAAGATTTCAGTCCTCTGGGCATCCGTCGGCTTATGATGTCTTCAGTGAACAGTCCAACTCCCTTGAAGTTGTGGGACTCGCCTTCTCGTGATGATAGCCCAGATGATTTGTTGAGAAGTGCTGCAAAAACTTTCACTAGTACGCCATCCATTTTAAAGAAGCGACGCAGGGACTTGTTATCACCATTATCAGATAAGAGAATTGAGAAGAAACTTGAGACTGACACCACATTCACGTTGACTACACATTTTTCACGTTTGGATGTCATGTTTGATGATAATGAAACTCAGGCTGCGAATATGCTTCCTCCATCCTCATTACAGAAAATTAAAAATGGAGCCTCTGATGATGATAAAGAAAATCGTGAGCCAGTTTTGAAAGAAAATTGTGAACCAGCTTTGGAAGGAGAACATGTAGAGGGAAAAGAGGCATCTGCCATTTTGAGGTGCAAAGAGTCAGAAAATGATGCTGGTAATAACTCTCTGGACGTTGATTCGAAGATGGAGATAGATGTTGACGCTGATCCTGCTGCTGAGATTGGGCAACAACCTTCCGGAGTCTTAATCGAACGTGATATGAATGACTTGCTATTGAATTCTCCAAATCAAATTCGTTTGAGCTTGGATAGAACTCACATTTCATGTGCTAGAACTCCCAAAAACCTGAACGATAGAAGCTTGGAAGCAGCCCCACATCAGAATATCGCTCAAAAGTCATTTCATGGAAATCCCTGCACAAGTGATTGCTCCCCTTCTATTTGTGTAAAGGAGCGTGAAATTTTTTCAGTTCCACCATCTCATTGTTCATCTGCCCCTGGGGAGAATTCCGGTGATCATCCAGGGAATGATGCTGGTTTTGAAGCATTCAACATATTTGGGGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCCCCTTGGTTCATTAACACTTTTCTGACTAGCCCCAGGATTGATACTGAAATAACTATTGAGGACTTTGGGTATTTAATGAGCCCAGGTGATAGAAGCTATGATGCAATTGGGTGGATGAAGCAGGTCAAGGAACAAACTGCGGCCGCATATGCCAATGCTGAGGAGATTTTGGAAATTGACACTCCTAAAACAAAAGATGCATCTGGAAATGCCGGGGATGGGGACCAGGAAAGAAGAGACCCTGATAATCAGCCTGGCAATCAATGTCAGTTAGCTTCTTCAAATGCTTTGATGGAGCGACGGGTACTTGACTTTAGTGAATGTGGAACACCAGGAAAGGAGAACAACAAATCTTCAGCTATGACCTTCCCAAGCCCCTCTTCATATTTGTTGAGAGGGTGTAGATAG 6543 0.4263 MEGGRTTPASSDGLGDCAQKIRALHGRTTGPTRRSTKGQWTPEEDEILRTAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTISQHLPGRIGKQCRERWHNHLNPSINKEAWTYEEELALVRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQFQDVPLVGHPNQPVVSTSSRRQCSGDDNGYQGTEGEEVSECSQESANVSCFPSARDMTNVVLNTSEELRPNEDISVGKEHSSSQASCLEPYCISLDDVAISIPDVAHEDPSCADFIEQTYSHDPGNSASRDSQFTFHAVPNICSSDLDQECSLLRRDSADCVESHGILSVPLHTLVGSGISTSMGPPSIDPAKQDHMLISSEECYRVLYSEAINDGCFSSGDYNQNVNPVSYGCISLFGQSSDFHIPETGGTSTSFQTCPVKSNHLIGSSCSQSPVLSDDDGRLVYTAEANNPFGADDLQFVSRAQDSFIYANNSSVAPCTEAIDSGGMHEEQDTVKDASKLVPVNTFGFSSDAKPTCRPMEERRDVYIEQLEIGALCYEPPRFPILDIPFLSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWDSPSRDNSPDALLRSAAKSFTGTPSILKKRHRDLLSPLSDKRADKKLETDLTSTLATHFSRLEVMFDDNETREVGMLSQPLMDKDKSGAPVEDTKNCGQSLKGEYEEGRNQCTLGNKKSEKETADGDPQDFQRPHNDSKMKVDVDVDVDKAAEIVQQPSGVLTEHDMNDLLLYSPNQMCFKPDRTHCSSARTPKSLNYRNLEATLDKSISSNPCSSDRSPSVRVKNHDVSSFPVTCVSSLCSSAPAENIGDHPGNDAGFDAFSIFGGTPFRRSIESPSAWKSPWFMNTFLSSPRLDTEITIEDFGYFMSPGDRSYDAIGLIKQVKEQTAAAYANAQEILDSVTPKAKDSSENVRDADQEKDKLDHPVNALVERRILDFSECKTPGKEGNGKGSAQTFSSPSSYLLKGCASVVIAINELNLAFGGGLGVGMKGEQVSISTPSIRLSVRPLTIGFETSESAPLCLNFEWRELRIVLLTLNFTYRSSFVDLPYNSLDLQMHTISVVSLFICRSGILSEAQSGNVALDTDLWRTSGPTRRSTKGQWTPEEDEILQKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKMDSYLASGLLIPHVGHPNQPVVSTSSRLLYSGDDSGQKGIGEEVSECSQESASAGRLPVSREMTRAVLHAREETKQNEYSSIGKEQSPSQASCSEPYYMPLDEVTISNSDIAREEASSSRFIEQKYSQEPGNSAGMDNGFQLHGLPCISSLDLGQEFSLLQEDCIVSDENRDIVNAQFHTSAGLGIATSMAPTSMDSSKPEDVLMADEECCRFLFSDAMNDGTFSTGDHNKGVDMVLPARTSNLFQSSEIQISDADRTSAALKTCPTRSDNLIEPSCCQSFPIVPSSLLVNDGRVLYTAEAARMYGGDNQHFASNAHDSFIHPNDSSISPCIDIIDSAEMHDGTNIVNDALRLVPVNNFTCASDAKQTCNPMDEKADVQTEQEDTGSLCYEPPRFPSLDIPFFSCDLIQSGGDMQQDFSPLGIRRLMMSSVNSPTPLKLWDSPSRDDSPDDLLRSAAKTFTSTPSILKKRRRDLLSPLSDKRIEKKLETDTTFTLTTHFSRLDVMFDDNETQAANMLPPSSLQKIKNGASDDDKENREPVLKENCEPALEGEHVEGKEASAILRCKESENDAGNNSLDVDSKMEIDVDADPAAEIGQQPSGVLIERDMNDLLLNSPNQIRLSLDRTHISCARTPKNLNDRSLEAAPHQNIAQKSFHGNPCTSDCSPSICVKEREIFSVPPSHCSSAPGENSGDHPGNDAGFEAFNIFGGTPFRRSIESPSAWKSPWFINTFLTSPRIDTEITIEDFGYLMSPGDRSYDAIGWMKQVKEQTAAAYANAEEILEIDTPKTKDASGNAGDGDQERRDPDNQPGNQCQLASSNALMERRVLDFSECGTPGKENNKSSAMTFPSPSSYLLRGCR 2180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2418 2180 CDD SANT 91 135 IPR001005 -
Acco05g2418 2180 ProSiteProfiles Myb-like domain profile. 1268 1318 IPR001005 -
Acco05g2418 2180 FunFam Transcriptional activator Myb isoform A 1221 1273 - -
Acco05g2418 2180 Gene3D - 1221 1272 - -
Acco05g2418 2180 Gene3D - 89 140 - -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 2152 2180 - -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 211 235 - -
Acco05g2418 2180 CDD SANT 1275 1315 IPR001005 -
Acco05g2418 2180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Acco05g2418 2180 FunFam Transcriptional activator Myb isoform A 89 141 - -
Acco05g2418 2180 ProSiteProfiles Myb-like domain profile. 1216 1267 IPR001005 -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 212 235 - -
Acco05g2418 2180 FunFam Transcriptional activator Myb isoform A 1168 1220 - -
Acco05g2418 2180 Gene3D - 142 201 - -
Acco05g2418 2180 Gene3D - 1274 1329 - -
Acco05g2418 2180 Gene3D - 36 88 - -
Acco05g2418 2180 Gene3D - 1168 1220 - -
Acco05g2418 2180 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Acco05g2418 2180 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Acco05g2418 2180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 1393 1413 - -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 2156 2171 - -
Acco05g2418 2180 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Acco05g2418 2180 Pfam Myb-like DNA-binding domain 1169 1215 IPR001005 -
Acco05g2418 2180 Pfam Myb-like DNA-binding domain 1273 1315 IPR001005 -
Acco05g2418 2180 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Acco05g2418 2180 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Acco05g2418 2180 Pfam Myb-like DNA-binding domain 1221 1267 IPR001005 -
Acco05g2418 2180 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Acco05g2418 2180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Acco05g2418 2180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1216 1271 IPR017930 -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 2105 2138 - -
Acco05g2418 2180 FunFam Transcriptional activator Myb isoform A 36 88 - -
Acco05g2418 2180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1272 1322 IPR017930 -
Acco05g2418 2180 FunFam Transcription factor MYB3R-2 142 204 - -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 741 767 - -
Acco05g2418 2180 SUPERFAMILY Homeodomain-like 1167 1229 IPR009057 -
Acco05g2418 2180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1164 1215 IPR017930 -
Acco05g2418 2180 SMART sant 36 85 IPR001005 -
Acco05g2418 2180 SMART sant 140 188 IPR001005 -
Acco05g2418 2180 SMART sant 1272 1320 IPR001005 -
Acco05g2418 2180 SMART sant 88 137 IPR001005 -
Acco05g2418 2180 SMART sant 1168 1217 IPR001005 -
Acco05g2418 2180 SMART sant 1220 1269 IPR001005 -
Acco05g2418 2180 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Acco05g2418 2180 SUPERFAMILY Homeodomain-like 1218 1314 IPR009057 -
Acco05g2418 2180 CDD SANT 40 83 IPR001005 -
Acco05g2418 2180 MobiDBLite consensus disorder prediction 711 767 - -
Acco05g2418 2180 CDD SANT 1223 1267 IPR001005 -
Acco05g2418 2180 CDD SANT 143 183 IPR001005 -
Acco05g2418 2180 PANTHER MYB PROTEIN-RELATED 1169 1254 - -
Acco05g2418 2180 FunFam Transcription factor MYB3R-2 1274 1339 - -
Acco05g2418 2180 CDD SANT 1172 1215 IPR001005 -
Acco05g2418 2180 ProSiteProfiles Myb-like domain profile. 1164 1215 IPR001005 -
Acco05g2418 2180 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2418 Acco-ChrAcco05 39895944 39910615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2418 1159 2180 MYB Transcription Factor Family AT4G32730 43.208 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g2418 Myb_DNA-binding 2.4e-14 CL0123