Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2364 ATGGCGTTGGAGCTCATGAGATTTCCGAAAATGGACGAGCAGAAAGCAATTCAGGAGGCTGCGTCGGAGGGATTGAAGGGTATGGAGAATCTAATCCGTCAGCTATCTCACAAACCCAATCTCGTCGACTGTGCTGATCTCACCGATTTTACTGTTTCTAATTTTAAGAAACTCATCTCTCTTCTAAATCGCACTGGCCATGCCCGATTCAGAAGAGCACCGATCTCCTGCTCTTCCAGCTCGTCTCCCCCTTCCACTTCAAAGTTACCGCCGCCATCATCCACCGCGCCCTCGTCGGGCAACATTTCCCCATCTCAAATTCCGAATCTATCACCGGCGCAGTTCACCTCTCCGGCGCCGATTGTAAATCCAGTAACCGTGCATCACGCTCCGATCAACAACAACTCTGCTCCATCTAGTTTTGTCCCGGCTCATTCACAGTCTCTGACTCTCGATTTCACAAAGCCTAATATATTGAGCTCCAACACGAAGCCCCTCGAGCTGGAGTTCTCAAAGGAAACCTTCAGCGTGTCTTCAAACTCATCCTTCATGTCGTCGGCCATCACCGGCGACGGTAGTGTATCGAACGGCAAACAAGGATCGTCGATCTTCCTTACACCGGCAGCGCCAACGGTCTCCGGCAACGGGAAGCCACCCTTATCGACGAAGAAGAGATGCCACGAGCACCGTGAGCACTCCGAAGATCTATCCGGCTCCAGCAAGTGCCACTGCTCAAAAAGAAGGAAGAATCGGATGAAGAAGGTTGTACGAGTGCCGGCGATTAGTTCGAAGGTCGCGGACATTCCGCCGGACGAGTACTCATGGAGGAAGTACGGTCAGAAGCCGATCAAGGGATCACCGTACCCAAGGGGTTACTACAAGTGCAGTACAGTAAGAGGCTGTCCGGCGAGGAAGCATGTAGAACGGGCCCTGGATGATCCGGCGATGCTGATTGTAACCTATGAGGGGGAGCACCGTCACGCAATGCAGGTGGCGATGCAGGAGATCGGAGCCGGAGGGATCGGGTTGGTACTTCAGTCAACGTAA 1047 0.5301 MALELMRFPKMDEQKAIQEAASEGLKGMENLIRQLSHKPNLVDCADLTDFTVSNFKKLISLLNRTGHARFRRAPISCSSSSSPPSTSKLPPPSSTAPSSGNISPSQIPNLSPAQFTSPAPIVNPVTVHHAPINNNSAPSSFVPAHSQSLTLDFTKPNILSSNTKPLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGNGKPPLSTKKRCHEHREHSEDLSGSSKCHCSKRRKNRMKKVVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERALDDPAMLIVTYEGEHRHAMQVAMQEIGAGGIGLVLQST 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2364 348 Pfam WRKY DNA -binding domain 271 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2364 348 MobiDBLite consensus disorder prediction 190 209 - -
Acco05g2364 348 MobiDBLite consensus disorder prediction 92 115 - -
Acco05g2364 348 SUPERFAMILY WRKY DNA-binding domain 267 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g2364 348 MobiDBLite consensus disorder prediction 190 244 - -
Acco05g2364 348 MobiDBLite consensus disorder prediction 221 242 - -
Acco05g2364 348 Gene3D WRKY domain 256 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g2364 348 MobiDBLite consensus disorder prediction 74 115 - -
Acco05g2364 348 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2364 348 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2364 348 FunFam WRKY transcription factor 65 253 330 - -
Acco05g2364 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 329 IPR044810 GO:0003700
Acco05g2364 348 Pfam Plant zinc cluster domain 223 267 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2364 Acco-ChrAcco05 39431056 39432564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2364 1 347 WRKY Transcription Factor Family AT2G24570 57.778 3.36e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g2364 WRKY 1.9e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2364 05 39431056 39432564 Acco05g2364 05 39431056 39432564 ECH