Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2347 ATGGATAGAGAGACGGACGTCCCCACCCAAAACCCTAAACGGCGGGAAAAGGGTAGCACTCTTGGCGGGAAACAATATAATTTCATCCCCTTGATCAAATCTTTCGTATTTAAGATTTCGCTGCCACTCGGTAATAAACCGTTTCTTTCTCTCGCGATCTCCTTTGCTTTCTCCCTTCTGGATGTATTGATGTTTTCCGGGAGCCAGCTTGATGCCACTGCCGCCTTCTCAGGCGGCGGTTTCATGACCACGGAATCTACCCAGACCAACGATTCATCTCCGTTACCGGCCAGAAGCCGTGAGACTCAGGGTTTAGTTCCGGTAACAGTAAAGCAGATAAGCGAAGCCTCTCAATCTGGTGATGAGAAGTCGAATTTCATAATCAACGGCGTGGATGTTACCAATGTAACCTTGATTGGTATGGTGTTTGAGAAAGTTGACCGAAGCACTGACGTCAGTTTTGTTCTAGATGATGGAACAGGACGGATCAAGTGTCGAAGATGGGTGAATGAGTCTTTTGATACAAAGGAAATGGAAGAAATACGAGATGGCATATACGTTCGTGTATATGGGCACTTGAAAAGCTTTCAAGGTGTAAAACAGGTTGTTGCTTTCTCAATCAGGCCAGTGATGAGTTTTGATGAGATTTCTTTTCACTTTATTGATTGCATACATAATCATCTACACGCCAAAGCAAAGGTTGAAGGAGTTACTCCTGCTCATCCTCCACCTATAAACTCATTTCAAGTATCAAATGGAAGTCAAGTGCCATCGTCTAATCCATTATATGCTCAATATAGCATGGATGGGTTTAAGGATTGTGATAAATTGGTCCTTGATTATCTCAATCAGCACTCAGACATGTCTGATGATAGGGGAATACATGTTAATGAGCTATCTAGAGAGCTTAAGCTTCCATTGGAGAAGATCATGTTATCACTGAAGGCTCTTGGCGACGATGGACTGGTATACTCCACCATTGATGACAATCACTACAAGCAGGCTTGA 1008 0.4345 MDRETDVPTQNPKRREKGSTLGGKQYNFIPLIKSFVFKISLPLGNKPFLSLAISFAFSLLDVLMFSGSQLDATAAFSGGGFMTTESTQTNDSSPLPARSRETQGLVPVTVKQISEASQSGDEKSNFIINGVDVTNVTLIGMVFEKVDRSTDVSFVLDDGTGRIKCRRWVNESFDTKEMEEIRDGIYVRVYGHLKSFQGVKQVVAFSIRPVMSFDEISFHFIDCIHNHLHAKAKVEGVTPAHPPPINSFQVSNGSQVPSSNPLYAQYSMDGFKDCDKLVLDYLNQHSDMSDDRGIHVNELSRELKLPLEKIMLSLKALGDDGLVYSTIDDNHYKQA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2347 335 MobiDBLite consensus disorder prediction 1 21 - -
Acco05g2347 335 FunFam Replication protein A 32 kDa subunit 266 335 - -
Acco05g2347 335 SUPERFAMILY Nucleic acid-binding proteins 105 230 IPR012340 -
Acco05g2347 335 MobiDBLite consensus disorder prediction 1 20 - -
Acco05g2347 335 Gene3D - 97 231 IPR012340 -
Acco05g2347 335 FunFam replication protein A 32 kDa subunit A-like 98 232 - -
Acco05g2347 335 CDD RPA2_DBD_D 135 228 - -
Acco05g2347 335 Gene3D - 265 335 IPR036388 -
Acco05g2347 335 SUPERFAMILY "Winged helix" DNA-binding domain 269 333 IPR036390 -
Acco05g2347 335 Pfam OB-fold nucleic acid binding domain 136 209 IPR004365 GO:0003676
Acco05g2347 335 PANTHER REPLICATION PROTEIN A-RELATED 69 333 IPR040260 -
Acco05g2347 335 Pfam Replication protein A C terminal 254 330 IPR014892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2347 Acco-ChrAcco05 39308492 39311959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2347 64 333 Core DNA Replication Machinery Family AT2G24490 46.545 4.94e-88 264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2347 05 39308492 39311959 Acco05g2347 05 39308492 39311959 ECH