Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2338 ATGCAACAGAATTTCGGTCAACAAAGTTTACACTCTTTTGTTTGCTCAGTTCAAATGTGTGCTGCTCGTCAAATCTTCACGCACATTATTTATTTTCCTGAATATGAAGCATTTGAGAATCCTAAGCGATATTTTATCCGGCAGCTGAGACCCGCTTTTCTTTCTCCCAGGAATTCGTTGCATTCTAGTATGAGTAGGCCAGCTACACGAAGTAAAAATAAAAGACAAAGACAAGTCGATGATGGTGCTGGGACTTCTGAAATTTGGAGGAAAATTCATGAAACAGGTGTGGTAACTGATGATGATATAAATCAACTTTATATGATTTGGAAGCCAGTCTGTTCAAGCTGCCGCGTTAATACTAAAGACAACCCTAATTGCTTTTGTGCGTTGATTCCACCTCCCAATGGAAACCGGAAATCTGGCTTGTGGCAGAAGGTGTCAGGTATTGTAGACAATTTTGGTCCTGATCCAACTAAGGACCTTCGCGAATCTGCTAACTCACCTGCTGGTCTGACAAATCTTGGGGCCACATGCTATGCCAACAGCATACTGCAGTGCTTGTACATGAATAAATGTTTCCGGGAAGGCATATTTTCTGTAGAACCAGATCTTTTGCAACAGCAACCAGTGTTAAATCAATTGGTGCGGCTGTTTGTGCAGTTGCACATTAGTAAAAGGGCTTTTGTGGATTCATTTCCATTTGTCAAAACACTGGAGTTAGATAATGGAGTTCAGCAGGATAGCCATGAGTTTTTGACATTGCTTTTGTCTTTGCTCGAGCGTTGTCTAAGCCATTCTAAAGTTTCTAAAGCAAGAACAGTAGTTCAAGATCTTTTCCGGGGAAGCGTGTCTCACGTGACAACCTGCTCACAATGTGGAAGAGATTCTGAAGCATCTTCTAAAATGGAAGACTTCTATGAGCTGGAGTTAAATGTTAAGGGATTTAAAAGTTTAGATGAGAGCCTAAATGATTATCTTGCTGTGGAGGAGCTTTGTGGAGATAATCAATATTTTTGCGCATCATGTAAAACAAGAGTGGATGCTACTCGTAGCATCAAGCTGCGCACATTACCTGATGTACTTAATTTTCAACTTAAACGTTGTGTCTTCCTTCCAGAGACTACAACAAGGAAGAAAATTACTTCTGCATTTTCTTTTCCAGCTAAGCTTGACATGCAGCCTAGATTGTCTGAGCCATCGAAGTCTGAATTGATTTATGACTTATCAGCTGTACTTATTCACAAGGGAACTACTGTTAATAGTGGCCATTATGTAGCTCACGTTAAGGATGAGAATACTGGGCAATGGTGGGAATTTGATGATGAGCATGTCACTGAGTTAGGCTGTCATCCATTTGGTGATAGATCTTCAAATTCTTCGGCGAAATCTGTTAGAACTGAAACTGTTAATTCTGATTCATCTGAAGTAAGGATAGCTGACAGTAATGGAAATGGTCCGGATGCCTCTCACTCACAATCTTCTCTTGTGGAGACATTTGCATCTAGTGATGCATACATGTTGATGTACAATCTTAAGCATACCAAAAATGTAGTCAAAATGGGTGATGTGCTTAGCAATGGTGATGCTGTTCCTGCACAAGATAGATTTCCTCTTTTATCTCATCTTTTTGATGAGATTCAGAACCTTAATGCTTCATATGTTGATGAGTGTGCGCAGTACAATCAAAGGAAAGAGTTAGAACTGAGTCGAATCACTGAAAGGAGACAAGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTCAACCACTTGAGCAACCCTTTTATTGGATTTCTAGTGACTGGCTTCGCCATTGGGCCGACAACGTTAATCCATGCACTCTTGACAATACATCCATTCAATGCTCACATGGGAAAGTTTCTGTATCCAAGGTTTCTTCAATGAAGCGATTGTCAGATAAAGCATGGGATAAATTGTTTTCAAAGTATGGTGGGGGGCCAACACTATCGCATAGTGATTGTTGTTGGGATTGTCTTATTGATGGAGCTCGCTCTGTGGTGTCAGCTGATACCTATCGTGACCGAAGAGAATCATTGAAGCAACTTGCACGGGACATTCTTGACAGAAACTGTCCTGATGGAAAGTATTATGTATCTAGACCATGGTTGCAACAGTGGTGGAAAAGAAAAGTACTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCATCAATTAGTTGCCCACATGGGCAACTTTTACCTGATCAAGCTGCTGGTGCTAGGCGGGTGCTTGTTCCTGAGAGCTTTTGGAACTTCTTATATGAAGATGCTCTTTCTGTAAAACCTGATGATTCTTTGGATTGCCCAACATTTCCTTCAGACTCAGTGCCTTGTTCCCAATGCAGTGATGAATTATCTGAAGTAGCATGCTTGGAGGACTCTATAAAATTAGTGAAGCAAGTGCAACGTCAGAATCATGAGAAATTATTGCTGGCTAAAAGCATGCCTCTCACATTGCATTGCAAATATTTCCTAGTGCCTTCTCCTTGGATTTCAAAATGGAGGAGTTACATGAGTTCCTCCGTCAAGAATTCAGACAAACCTGAAACTTTAGACAGGATAATCAATTCCCTTATGTGTGAAAAGCACTCCCTTCTTGTGGAAAAGCCCCTTGAACTGGTTTTCAGACGTGGTACTATAGTCCAGCGAGAATCTTCTGCAGGTGGTTTAACTATGATATCTGAGAATGATTGGAAATGCTTTTGTGAGGAATGGGGTGGTACTGAGACGAAAGGTATATCAGCAACAATTGAGAATATCAATGATTCAGAAAATATTTTGACTGGATTCAGCTCAGATACACCAATATGTGAGGATCAGTTGAATGATAAAGTAAATAATGATAGCGGGACTAGTAAGCTGGTGATTAAGACTTGTCCAGAGATTTGTGAAAGTTGCATAGGAGAAAGGGAAAGCTGTGAGCTAATGCAGAAACTTAACTATAGCAATGAGAACATATCTGTGATTCTTGTAAGGGGAAAGGAAGTTCCTAGATCAATATTAGAGGCTTCAAAGGGCTCAGTTGAAACAGATAGACGTGTTTCCAAGCGCTCCCGGAAATCTAAAAATGGGACTTCGATAAGTCTTAAAGTTTCTGCTTCAACATCACTGTACCAGCTAAAAATGATGATATGGGAGGCCTTTGGGGTTGTAAAGGAAAACCAGATATTACAGAAAGGTGACAGGACAATTGATCATGAGGATGAGTGTGCTACGCTTGCAGACGTAAACATATTCGCTGGAGATCAGATTATAGTGAGGGACTCAGAGATTCATGAAAATAGAGATATTGCTGATGAGATTTGTGATGATAAAATGGAGATGCAGCGGAGTGAGGGAGGGTTTCGTGGAACGCTTCTGACAGCAGACGTTTCATCTCAGGTTGTTTGA 3414 0.408 MQQNFGQQSLHSFVCSVQMCAARQIFTHIIYFPEYEAFENPKRYFIRQLRPAFLSPRNSLHSSMSRPATRSKNKRQRQVDDGAGTSEIWRKIHETGVVTDDDINQLYMIWKPVCSSCRVNTKDNPNCFCALIPPPNGNRKSGLWQKVSGIVDNFGPDPTKDLRESANSPAGLTNLGATCYANSILQCLYMNKCFREGIFSVEPDLLQQQPVLNQLVRLFVQLHISKRAFVDSFPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVSKARTVVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGFKSLDESLNDYLAVEELCGDNQYFCASCKTRVDATRSIKLRTLPDVLNFQLKRCVFLPETTTRKKITSAFSFPAKLDMQPRLSEPSKSELIYDLSAVLIHKGTTVNSGHYVAHVKDENTGQWWEFDDEHVTELGCHPFGDRSSNSSAKSVRTETVNSDSSEVRIADSNGNGPDASHSQSSLVETFASSDAYMLMYNLKHTKNVVKMGDVLSNGDAVPAQDRFPLLSHLFDEIQNLNASYVDECAQYNQRKELELSRITERRQEVRSVLAEAPVQPLEQPFYWISSDWLRHWADNVNPCTLDNTSIQCSHGKVSVSKVSSMKRLSDKAWDKLFSKYGGGPTLSHSDCCWDCLIDGARSVVSADTYRDRRESLKQLARDILDRNCPDGKYYVSRPWLQQWWKRKVLDAPSEADAGPTASISCPHGQLLPDQAAGARRVLVPESFWNFLYEDALSVKPDDSLDCPTFPSDSVPCSQCSDELSEVACLEDSIKLVKQVQRQNHEKLLLAKSMPLTLHCKYFLVPSPWISKWRSYMSSSVKNSDKPETLDRIINSLMCEKHSLLVEKPLELVFRRGTIVQRESSAGGLTMISENDWKCFCEEWGGTETKGISATIENINDSENILTGFSSDTPICEDQLNDKVNNDSGTSKLVIKTCPEICESCIGERESCELMQKLNYSNENISVILVRGKEVPRSILEASKGSVETDRRVSKRSRKSKNGTSISLKVSASTSLYQLKMMIWEAFGVVKENQILQKGDRTIDHEDECATLADVNIFAGDQIIVRDSEIHENRDIADEICDDKMEMQRSEGGFRGTLLTADVSSQVV 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2338 1137 CDD Ubl_USP48 1027 1128 IPR044743 GO:0004197|GO:0004843|GO:0016579
Acco05g2338 1137 ProSiteProfiles DUSP domain profile. 805 925 IPR006615 GO:0004843
Acco05g2338 1137 SUPERFAMILY Cysteine proteinases 168 510 IPR038765 -
Acco05g2338 1137 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 407 425 IPR018200 GO:0004843|GO:0006511
Acco05g2338 1137 CDD Peptidase_C19L 171 510 IPR033841 GO:0004843
Acco05g2338 1137 MobiDBLite consensus disorder prediction 452 493 - -
Acco05g2338 1137 Pfam DUSP domain 593 657 IPR006615 GO:0004843
Acco05g2338 1137 Pfam Ubiquitin carboxyl-terminal hydrolase 171 510 IPR001394 GO:0004843|GO:0016579
Acco05g2338 1137 Gene3D - 1026 1097 - -
Acco05g2338 1137 MobiDBLite consensus disorder prediction 453 493 - -
Acco05g2338 1137 Gene3D Cysteine proteinases 156 513 - -
Acco05g2338 1137 ProSiteProfiles DUSP domain profile. 677 779 IPR006615 GO:0004843
Acco05g2338 1137 MobiDBLite consensus disorder prediction 57 84 - -
Acco05g2338 1137 FunFam Ubiquitin carboxyl-terminal hydrolase 26 561 659 - -
Acco05g2338 1137 Gene3D - 801 921 IPR035927 -
Acco05g2338 1137 SUPERFAMILY DUSP-like 572 661 IPR035927 -
Acco05g2338 1137 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 118 513 - -
Acco05g2338 1137 SMART dusp 588 664 IPR006615 GO:0004843
Acco05g2338 1137 ProSiteProfiles DUSP domain profile. 570 662 IPR006615 GO:0004843
Acco05g2338 1137 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 170 513 IPR028889 -
Acco05g2338 1137 SUPERFAMILY DUSP-like 697 763 IPR035927 -
Acco05g2338 1137 SUPERFAMILY Ubiquitin-like 1030 1096 IPR029071 -
Acco05g2338 1137 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 171 186 IPR018200 GO:0004843|GO:0006511
Acco05g2338 1137 FunFam ubiquitin carboxyl-terminal hydrolase 48 157 513 - -
Acco05g2338 1137 Gene3D - 561 660 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2338 Acco-ChrAcco05 39233950 39243803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2338 168 445 Miscellaneous Gene Families AT4G31670 30.000 1.78e-26 114