Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2335 ATGGCTGCTCTAGAATTCTTTTCCTTTCAAAGTAACAAACAAAACCAACTAACTTCAGACGTTGATGATGATGCTGAAGTTGGTAGTGGTGACTGGAATGTCACGAAAATGGCCGCGGCTTCGAAGATTACAGTCGCTGCTAAACTCGTATATCGTCTCCGAGATGTTACTGTTCGCACCACCAATTCTTCTCCTTCTCTCATTGTTTCTTCTAATGTCACGCTGAGGTCTATTACTAGTGCTACTACTTCCCAGAAGAAGAAGAAGAAGCAGAAGTTAGTGGCGGCGGTTGCCGCACATAAATCGGCATCGGCGGCGGCGGCGGGTTTGGTGAAGGAAAAGAGGAGGACGCGTTCTGACAAAGAATTTGACAAGGAATCGATTTTGCAATACGGAGATAAACCCTCTCATATTCCTGTGATGCTCGCTGAAGTACTGGACGTCTTCTCATCTACTTATTGGAGACCTTTACACTCTTTCGTCGATTGCACGCTCGGAGCTGGTGGTCATTCCTCCGCTATAATTAATGCTCATCCAGAGTTGAAGTTTCTGGTTGGCATGGACGTAGATCCTGTGGCCCATGAGGAGGCTCAAACTCGAATTAATTCCGTCTTGCATTCTGACTCATACTCTAGTAGCCCTGCTTCTGACCTGAAAGTATACCACATGTTAAAAAATTTTCGACATATCAAGTCTGCAATAAGTGAAACTGGCAAGGAACACTTGGTCCGTGGAGTTGATGGCATTTTGATGGACTTGGGAATGTCATCCATGCAGGTGGACAATTTTCAGAGAGGATTCAGTGTGCTCAGTGACGGACCACTTGACATGCGTATGGACCCTCAGGCAAGTCTTCGAGCTGAAGACATATTAAATTCTTGGCCATCTGCTGAAGTGGGCCGTATCCTGCGAGAATATGGAGATGAAAGCAATTGGCGCACATGGCAAAATAAGATTGTTGAAGCCCGATTACACGGGGGATTGCATTCTACTAGTGATTTGGTAGATCTTATTAAGCGCAGGTGTCATCCAACGAAAGGTGGAAGGCAAGGTTGGATAAAGACAGCAACCCGGGTATTTCAAGCTCTGAGAATTGCAGTTAACGATGAACTGAACACACTTAAAGATTCCCTAAATTCTTGCTTTGAATGCCTCGCACCTGGAGGTAGGCTTGCAGTCATATCTTTCCACAGTCTAGAGGACAGAATTGTGAAGCAAACGTTTCTTGATATCATTAAAAGGGAGACCAATGATATAGACGAAGTGGAGAAGAACAATGATGATTCAAGAGATATGAGGGGTGGGATTGAAGAGAAAGAAACATGGATAAGACAAACAATACATGGATCAAATGGTACAATTTTAACGAAAAGGCCAATCACGCCATCTGGAGAGGAAGAAAAATTGAACCGCCGAAGTAGGAGTGCCAAGCTCAGGGTAATTCAGAAGCTCTATGTGTGA 1461 0.4449 MAALEFFSFQSNKQNQLTSDVDDDAEVGSGDWNVTKMAAASKITVAAKLVYRLRDVTVRTTNSSPSLIVSSNVTLRSITSATTSQKKKKKQKLVAAVAAHKSASAAAAGLVKEKRRTRSDKEFDKESILQYGDKPSHIPVMLAEVLDVFSSTYWRPLHSFVDCTLGAGGHSSAIINAHPELKFLVGMDVDPVAHEEAQTRINSVLHSDSYSSSPASDLKVYHMLKNFRHIKSAISETGKEHLVRGVDGILMDLGMSSMQVDNFQRGFSVLSDGPLDMRMDPQASLRAEDILNSWPSAEVGRILREYGDESNWRTWQNKIVEARLHGGLHSTSDLVDLIKRRCHPTKGGRQGWIKTATRVFQALRIAVNDELNTLKDSLNSCFECLAPGGRLAVISFHSLEDRIVKQTFLDIIKRETNDIDEVEKNNDDSRDMRGGIEEKETWIRQTIHGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKLYV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2335 486 NCBIfam 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 136 483 IPR002903 GO:0008168
Acco05g2335 486 Pfam MraW methylase family 136 483 IPR002903 GO:0008168
Acco05g2335 486 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 133 484 IPR002903 GO:0008168
Acco05g2335 486 Gene3D Vaccinia Virus protein VP39 137 481 IPR029063 -
Acco05g2335 486 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 484 IPR029063 -
Acco05g2335 486 SUPERFAMILY Putative methyltransferase TM0872, insert domain 265 368 IPR023397 GO:0008168
Acco05g2335 486 FunFam Ribosomal RNA small subunit methyltransferase H 263 370 - -
Acco05g2335 486 Coils Coil 412 432 - -
Acco05g2335 486 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 137 484 IPR002903 GO:0008168
Acco05g2335 486 Gene3D Putative methyltransferase TM0872, insert domain 263 370 IPR023397 GO:0008168