Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2325 ATGAAAAGCAAGCACAATGATCGTCAAATTTGTCTGGTTAAGTCAATGAGTCAAAATAAGGCACCATTACCATTGCTAGTTAGTAGGCGTTCCAGTGATGAAATCAGAAACTTGACCTTGGCCTCAGCATCAAGCGACCTCTCACCAGCATTTGATGCCAAAATTGTTGAAGAGAATCACCTAAACCTTAGAAAATATGTCATCGCTCCCTCTGATCATAGATATCGGCTGTGGCAGACATTCCTTGTTGCATTGGTGGTATATTCAGCATGGGCATCTCCATTCGAGCTGGCTTTCACAGAAGTGGCAGTTGGGTCGTTGTGGCCCGTTGATCTACTCGTCGATGCCTTCTTCGCCGTTGATATACTCCTTTCTTTCTTTGTGGCTTACTTAGACAAATCAACCTATCTCCTCGTTGATGACCACAAGATCGCCATCAGGCTTACAGAGGACAAGTCTGTATACCAAATCCGAAAGGGCAGAACGTATGAGGGCGAGGTCTTTGGTTTCCTAAGTATGCTTAGGCTTTGGCGACTAAGGCATGTTAGCCAACTTTTTGCAAGGCTAGAGAAAGACATACGAATTAGCTACTGGGCCACAAGATTTTTCAAACTTATATGCGTAACGCTATTTGTGGCGCACTTCGCAGGCTGCATGTATAATTGGATGGCTGCTCACCACAAAACACCTGAGAATACATGGATTGGGAAACTGCAAGATTTTGAACACAGGAGCGTCTGGCTGAGATACACGTATTCTATATATTGGTCTATGGTCACTCTTACCACAGTAGGCTATGGAGATTTTTGTGCTGTGAATATGGGCGACAAAATCTTCACTATCTTATATATGCTATTTAACATTGGCCTCAGTGCATATATAATTGGAAACATAACAACTCTGGTTGTCCATGGAACTGTCCGGACTTTTGCCCTGGTATGA 942 0.4342 MKSKHNDRQICLVKSMSQNKAPLPLLVSRRSSDEIRNLTLASASSDLSPAFDAKIVEENHLNLRKYVIAPSDHRYRLWQTFLVALVVYSAWASPFELAFTEVAVGSLWPVDLLVDAFFAVDILLSFFVAYLDKSTYLLVDDHKIAIRLTEDKSVYQIRKGRTYEGEVFGFLSMLRLWRLRHVSQLFARLEKDIRISYWATRFFKLICVTLFVAHFAGCMYNWMAAHHKTPENTWIGKLQDFEHRSVWLRYTYSIYWSMVTLTTVGYGDFCAVNMGDKIFTILYMLFNIGLSAYIIGNITTLVVHGTVRTFALV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2325 313 SUPERFAMILY Voltage-gated potassium channels 70 302 - -
Acco05g2325 313 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco05g2325 313 PRINTS EAG/ELK/ERG potassium channel family signature 122 131 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco05g2325 313 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco05g2325 313 PRINTS EAG/ELK/ERG potassium channel family signature 111 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco05g2325 313 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco05g2325 313 PRINTS EAG/ELK/ERG potassium channel family signature 88 95 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco05g2325 313 PANTHER POTASSIUM CHANNEL AKT1 40 311 IPR045319 GO:0005249|GO:0006813
Acco05g2325 313 FunFam Potassium channel KAT3 77 304 - -
Acco05g2325 313 Pfam Ion transport protein 76 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco05g2325 313 Gene3D - 76 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2325 Acco-ChrAcco05 39126856 39130968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2325 11 312 Ion Channels AT4G32650 51.887 2.06e-95 294