Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2324 ATGCTGGCACACATTCAATTGAAGTTCAAAACAGCAGAGGTACAGCAAGAAAAAGTGATACAGGACCTGCCCAAGGCTATCAGATCGAGTATTGCTCTGCATCTTTTCCGTGACATAGTTGAAAGTGCATATCTATTTAAAGGAGTCTCTGATCATTTTATCACCCAATTGGTGTCAGAAATCAAAGCAGAATATTACCCACCTAAGGTTGACATTATCTTGCAAAACGAGATGCCGTCATATTTCTATATTTTGGTATCTGGAGCAATGGATGTATTGACCAACAAGAATGGAACTGAACAGCTATTGTTGAAGCTGGAATGTGGAGGGATGGCGGGAGAAATAGGAGTCATGTTTAATATCCCCCAACCTTTCACAGTGAGATGTAGGAAGCTTTCTCAAGTCATCCGAATTAGCCATTTTCATTTCAAGCAAATGGTGCATCCACACAGTGATGACGGGAAAGCAATTATCACCAACTTCAATCAGATAACACAAGAACAAGGCATATATGGTGAAGGTTTAAATCATCATGAAGATGAACCATATAAACAAGGAAAGAAAGGAAATTATAATCCATCGTCAAGCCTGGTCCGACCTAGAGTGAGAAGTCATGGACATCATCCTAAGGACAATAGAATGGAAAATAAAACCTCACAAAAACTCGTACTTCTCCCAGATACAATGGAAGAACTTTTCAAATTAGCAGAGAAGAAGTATGGGAAAAGAGGAAGCAAGATTCTTATGGCTGATGGCTCAGAAGTAGAAAATTTAAGGGTCGTAAGAGAGAACGATAAGTTGTACATCTTCTAA 813 0.3911 MLAHIQLKFKTAEVQQEKVIQDLPKAIRSSIALHLFRDIVESAYLFKGVSDHFITQLVSEIKAEYYPPKVDIILQNEMPSYFYILVSGAMDVLTNKNGTEQLLLKLECGGMAGEIGVMFNIPQPFTVRCRKLSQVIRISHFHFKQMVHPHSDDGKAIITNFNQITQEQGIYGEGLNHHEDEPYKQGKKGNYNPSSSLVRPRVRSHGHHPKDNRMENKTSQKLVLLPDTMEELFKLAEKKYGKRGSKILMADGSEVENLRVVRENDKLYIF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2324 270 FunFam Potassium channel KAT2 33 169 - -
Acco05g2324 270 ProSiteProfiles cAMP/cGMP binding motif profile. 45 164 IPR000595 -
Acco05g2324 270 PANTHER POTASSIUM CHANNEL AKT1 195 269 IPR045319 GO:0005249|GO:0006813
Acco05g2324 270 CDD CAP_ED 45 158 IPR000595 -
Acco05g2324 270 Gene3D Jelly Rolls 10 169 IPR014710 -
Acco05g2324 270 Pfam Cyclic nucleotide-binding domain 65 147 IPR000595 -
Acco05g2324 270 ProSiteProfiles KHA domain profile. 201 270 IPR021789 -
Acco05g2324 270 MobiDBLite consensus disorder prediction 174 217 - -
Acco05g2324 270 SMART cnmp_10 45 162 IPR000595 -
Acco05g2324 270 Pfam KHA, dimerisation domain of potassium ion channel 201 269 IPR021789 -
Acco05g2324 270 SUPERFAMILY cAMP-binding domain-like 2 164 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2324 Acco-ChrAcco05 39116091 39118476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2324 1 270 Ion Channels AT4G32650 50.331 8.95e-90 278