Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2321 ATGGGAGAGGTTGCCGTTATGCGCTCAGAGTCTCTGCCTTTTGAGTGCAAAGACTTGAAACATGTGAATGTGAATGAGTTGTATACCCCACAATCAAATGCAGATCTTGGCCCTGTAGAAGAACTGAATCAATCAACAGATAACGAGATCAGTGAAGTACGAGAAAGAGGATATATGCAATATGGATGTTCACACTACCGGAGGAGATGTCGTATCAGAGCCCCTTGTTGCAATGAGGTTTTTGATTGCCGTCATTGTCACAATGAAGCAAAAAATAATATCAACATTGATCAGAAGTACAGGCATGACATTCCCCGCCATCAAGTTAGACAGGTGATATGTTCACTTTGTGGGACTGAACAAGAGGTTCGGCAGAACTGTATAAATTGTGGTGTTTGTATGGGAAAATACTATTGTGAGACATGCAAGCTCTTTGATGATGATATATCTAAGCAACAGTATCACTGCAATGGCTGTGGGATTTGCAGAGTTGGAGGGTGTGAGAATTTCTTCCATTGTTACAAGTGTGGATGCTGCTACTCTATCATGATGAAAAATAGTCACCCATGTGTGGAAGGGGCGATGCATCATGATTGCCCCGTCTGTTTTGAGTATTTATTTGAGTCCACAAATGATGTTACCGTTATGCCTTGTGGGCATACAATCCACAAGAGATGCCTGGATGAAATGAGGAAACATTTCCAGTACGCATGCCCACTCTGCTCGAAGTCAGTTTGTGATATGTCAAAGGTTTGGGAGAGGTTTGACCTGGAGATTGCTGCTACTCCTATGCCTGAACAATTCCAAAATAAAATGGTATGGATCCTTTGTAATGATTGCGGAAAAACTTCGCACGTTCAGTTCCATGTTGTGGCTCAGAAGTGTTCGCACTGTAAATCCTATAACACACGACAAACAAGAGGTTGA 927 0.4229 MGEVAVMRSESLPFECKDLKHVNVNELYTPQSNADLGPVEELNQSTDNEISEVRERGYMQYGCSHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINIDQKYRHDIPRHQVRQVICSLCGTEQEVRQNCINCGVCMGKYYCETCKLFDDDISKQQYHCNGCGICRVGGCENFFHCYKCGCCYSIMMKNSHPCVEGAMHHDCPVCFEYLFESTNDVTVMPCGHTIHKRCLDEMRKHFQYACPLCSKSVCDMSKVWERFDLEIAATPMPEQFQNKMVWILCNDCGKTSHVQFHVVAQKCSHCKSYNTRQTRG 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2321 308 ProSiteProfiles Zinc finger CHY-type profile. 56 132 IPR008913 GO:0008270
Acco05g2321 308 Gene3D - 270 308 - -
Acco05g2321 308 Pfam Zinc-ribbon 246 304 IPR039512 -
Acco05g2321 308 Pfam CHY zinc finger 63 144 IPR008913 GO:0008270
Acco05g2321 308 SUPERFAMILY RING/U-box 198 248 - -
Acco05g2321 308 SUPERFAMILY Zinc hairpin stack 135 192 IPR037275 -
Acco05g2321 308 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 42 307 - -
Acco05g2321 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 244 IPR013083 -
Acco05g2321 308 ProSiteProfiles Zinc finger CTCHY-type profile. 134 198 IPR017921 -
Acco05g2321 308 ProSiteProfiles Zinc finger RING-type profile. 199 242 IPR001841 -
Acco05g2321 308 CDD RING-H2_Pirh2-like 198 242 - -
Acco05g2321 308 SUPERFAMILY CHY zinc finger-like 60 134 IPR037274 GO:0008270
Acco05g2321 308 Pfam Ring finger domain 198 241 IPR001841 -
Acco05g2321 308 SMART ring_2 199 241 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2321 Acco-ChrAcco05 39099074 39101695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2321 61 304 C2H2 Transcription Factor Family AT3G18290 39.600 2.86e-53 185