Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2314 ATGTTAATATGTGAAGAGAAATTGGTCAAATAGATGAAAGAAGATGAGAAAATTGAGAAAGAAATTCGAAGTCTCGCAAAACTTCCTGAAAATAGGAGATGTATCAATTGCAATAGTTTGGGACCACAATATGTCTGCACAACCTTTTGGACATTCGTCTGCACAAACTGCAGCGGAATTCAACGAGAGTATAACCACAGAGTAAAATCAGTATCAATGGCTAAATTTACTGCAGAAGAAGTCTCTGCTCTTCAGGCAGGCGGCAATGAAAGAGCAAAGCATATTTATTTTAAAGACTGGGATCCTCACCGTCAATCTTATCCCGATACCAATAACATTGGAAGACTTCGCGATTTCATCAAGCAAGTCTACGTGGTTAGAAAATTCACTGGTGAAAGGACCCAAAATAATCTTCCCAGACTCAGATTGAATGACAAGGAGGAGTCCTACGACGGTAGGAAGCTCAGTTTTTCCCTAAGCGAACGATATGAATATAGAAATGATATGCGTAGTCCTAGTTCACGAGACGAGGACACGAGTGTCAAATTTTATTATGATGGCAGAAGAAGTCCTAGATATGTGCCGAGGAACGGGAACAACAGGAGAAATACTGTAAAAATTGAGGTTGTTGATGACAGGTTCCGAGACGATATATCTAGAACCCGCAGGTTTTTTAGCATAGAGTCAAAGCAAACAGCGGTTTCATCTGATGCAAAAAAGAATGTGGACGGAGAGAGGGGTACACCTGCCAGTGGAGAGGGATCCGTTAAGGAGAATCCAGATGAACAAAAAAGCACAGAAAATGCTACTGAAACTACAAGTGCATCGGAAGCTCAGTCTACATCTCAATCAAATGACGGAAGTGAATGGGCACCGTTTGAAATTTCCACAGAAAATGAATCTTCTCAAACTCCAAACAAGTGTTCCACAACAGAGACAACTTCTACAACAGAGACAAAGCCTAAAACTTTAGATGCTATAGAATTATTACTCTCTGAATTGTCTGGTCCCTTATATGCGACACCTAGTAGCATGTCTAATGTTCACGCTGCCGATAACGATGCTTCAGCAGCAAGAGTTGAAGATATCTCCGTGGATGTGGATTTAGCACCGCCGACCTCAGAAGGCCAGATGACTCCATCTCCCAACAATGTTGGTGCTTCCTCAGTTACGTCAACCAGTGATTCTGATCTGACGCAACCCTCAACAACTTGTAGCTCAGTGACACAATCAATGAGTACATCATTCAGAGATGTCCCTTCGCTTAATCAGCCAGAAGAAGTTACTCCTGAAGTGGAAGACCTTTCAAAGTCTGTTATGGAACTGTCTCTTCAAGCCGAGCCAGAAGCTGCTCAAGACACCAGATCTGATGTCAGATCCCAACCTAGGATAATAGAAAACAAGTGCAATGGAAGAAATGAACTTCCGGCGGATCTCTTTACTTCGAGCTACTTACCAGCCTCTGCACCGCAAGCAGGCTGGCAGAATTTTCGACCTCATAATATGGGATACGGCTTGCACTATTATTCTAATGCGGCACCAATCTTGGCATTTCCTACTGCAGCAAAGTCCACAAACCCTTTTGATATAACTGAGGGCAGACCTCAAGTGCATGCTTCTCCATTTCCTACTATGGCAAATTTGCATGGTGCCCAAACTGCTATGTCAAGTGGAGCAGGATTAGTGCGTGCTTCAAGCTCTGGCACTTTAGGGTTGATGGTGCCTCAATCCCCAAATTGTGCATCTTCAACGCCTCCACAGTTTCCCTTTACTCCTGGGTTTCCAGCTGGTGCATACTTTGAGCAAGTTAACAATAATAATATGCAAGCTCCCAGACCTCAAAGAGCTCGCAGCTTCAATGGTGAAATAACCTTCCAACATTCAGCCGGGGGATACATGGCTCCCGGCTTCACTCTAAATTCTTTTCCCAAGACTGGAGGTGGAAATCCATTTGGATAG 1959 0.4344 MLICEEKLVKXMKEDEKIEKEIRSLAKLPENRRCINCNSLGPQYVCTTFWTFVCTNCSGIQREYNHRVKSVSMAKFTAEEVSALQAGGNERAKHIYFKDWDPHRQSYPDTNNIGRLRDFIKQVYVVRKFTGERTQNNLPRLRLNDKEESYDGRKLSFSLSERYEYRNDMRSPSSRDEDTSVKFYYDGRRSPRYVPRNGNNRRNTVKIEVVDDRFRDDISRTRRFFSIESKQTAVSSDAKKNVDGERGTPASGEGSVKENPDEQKSTENATETTSASEAQSTSQSNDGSEWAPFEISTENESSQTPNKCSTTETTSTTETKPKTLDAIELLLSELSGPLYATPSSMSNVHAADNDASAARVEDISVDVDLAPPTSEGQMTPSPNNVGASSVTSTSDSDLTQPSTTCSSVTQSMSTSFRDVPSLNQPEEVTPEVEDLSKSVMELSLQAEPEAAQDTRSDVRSQPRIIENKCNGRNELPADLFTSSYLPASAPQAGWQNFRPHNMGYGLHYYSNAAPILAFPTAAKSTNPFDITEGRPQVHASPFPTMANLHGAQTAMSSGAGLVRASSSGTLGLMVPQSPNCASSTPPQFPFTPGFPAGAYFEQVNNNNMQAPRPQRARSFNGEITFQHSAGGYMAPGFTLNSFPKTGGGNPFG 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2314 652 SMART arf_gap_3 19 137 IPR001164 GO:0005096
Acco05g2314 652 MobiDBLite consensus disorder prediction 359 437 - -
Acco05g2314 652 PANTHER ARFGAP/RECO-RELATED 236 652 IPR044820 GO:0005096
Acco05g2314 652 Pfam Putative GTPase activating protein for Arf 20 131 IPR001164 GO:0005096
Acco05g2314 652 Gene3D Arf GTPase activating protein 9 139 IPR038508 -
Acco05g2314 652 MobiDBLite consensus disorder prediction 266 322 - -
Acco05g2314 652 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Acco05g2314 652 PRINTS HIV Rev interacting protein signature 50 67 IPR001164 GO:0005096
Acco05g2314 652 PRINTS HIV Rev interacting protein signature 31 50 IPR001164 GO:0005096
Acco05g2314 652 CDD ArfGap_AGFG 19 129 - -
Acco05g2314 652 SUPERFAMILY ArfGap/RecO-like zinc finger 19 130 IPR037278 -
Acco05g2314 652 MobiDBLite consensus disorder prediction 236 324 - -
Acco05g2314 652 FunFam Arf-GAP domain and FG repeat-containing protein 1 8 141 - -
Acco05g2314 652 MobiDBLite consensus disorder prediction 374 422 - -
Acco05g2314 652 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 137 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2314 Acco-ChrAcco05 39055438 39061948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2314 19 129 C2H2 Transcription Factor Family AT4G05330 31.897 2.65e-11 63.5