Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2302 ATGGCCATGCTGAGAATGGCACAGCATAACAATGGCAATCACAGTTCGAGCCAACAGTCAGTGAAATCAGTCTTTCATGACTTTATGGGCATGAAGCCCTCTGATTTGCCCCTCGTTGCGGCCCCTAAAACCACTGAAGCAAGGCCGTCGCAGGTGTCGGCATCGGTCTCTGTTGGTGCCTCTTCCGGTGTTGCCCGGGCCCCCCTCTCAACCATCTCTGATATTGCTTCTGAAAGACAGTTAGGAAATCACCTCGTGGGAGTCCCATTCTGTTGCCCGAGGAGTGATCTTTCTGGCACTGAGATTAGTAACAGAATACTAGGAAACAAGAGAAGTAATTCTGATTGCAGTTTCATGAGTTCCTCCAGAGATGCCTTCCGAATGGTTCCTGACTCTCTTCAAAATTTGCATTTATTGAAGTCAAGGAAGTCAACTTCTGCTTCTCTCATATATCAGCCTTCAACGGGCACTAAGACTGATTTCAATAAATGGGAGCGATCTGTTCTCATGAATACTGGTTCTTCCATGCAGCATCCACCACATGCGGGTCAATTAGCATCTTTTGTGCACCAGATATCTTCTAACAAGAGCAGGGATGATAATGCTGGTCCTTTATTTATTTCTCAATCTGCTGCTGATGAAGGATCTAGAACAGGAATCAAGGGCCCTGGGATCTTGAGTTCTGTGAACACTACCACTGCTGCTTATGAGAAATCTCTGTCTGCACTTGGTGAAAGCAGGCCAAAACCATTGACTAGTATAACAGACCCAGAATCTTCCATGCCTCCAAGTCAACAAGGGTTAGCATCTGCCAGCTGCCAGATGACTATTTTTTATGGAGGTCAAGCTCACGTTTTTGATAATGTCCACCCCAATAAGGCAGAAATTATAATGGCTCTAGCTGGGTCAAATGGTGGATGTTGGTCCACAACATACTCCCCAAAACCTACTGCGAAGTTCACTAATGACAGTAACATGCTGTGTGGAGGTAGTGAAGCTGGTATAGTGAGTAAGACTACACCCCCACAGGAGCCTCATGGCAGATTATCTTACGCCGGCACTTCTAGCCTTGCTATCAAATCTGGCAATCGACTGTCTACTCAAGCAGGGGCACATCAGGGAAGCTTTGTAGGCAAAGAAGATGTTAGGAATTCAATTAAAGCATCAGATCACAGTTCTGAGGACAAAAGGACGCAATCACATTGA 1206 0.4594 MAMLRMAQHNNGNHSSSQQSVKSVFHDFMGMKPSDLPLVAAPKTTEARPSQVSASVSVGASSGVARAPLSTISDIASERQLGNHLVGVPFCCPRSDLSGTEISNRILGNKRSNSDCSFMSSSRDAFRMVPDSLQNLHLLKSRKSTSASLIYQPSTGTKTDFNKWERSVLMNTGSSMQHPPHAGQLASFVHQISSNKSRDDNAGPLFISQSAADEGSRTGIKGPGILSSVNTTTAAYEKSLSALGESRPKPLTSITDPESSMPPSQQGLASASCQMTIFYGGQAHVFDNVHPNKAEIIMALAGSNGGCWSTTYSPKPTAKFTNDSNMLCGGSEAGIVSKTTPPQEPHGRLSYAGTSSLAIKSGNRLSTQAGAHQGSFVGKEDVRNSIKASDHSSEDKRTQSH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2302 401 ProSiteProfiles Tify domain profile. 268 303 IPR010399 -
Acco05g2302 401 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 132 341 IPR040390 -
Acco05g2302 401 MobiDBLite consensus disorder prediction 246 267 - -
Acco05g2302 401 MobiDBLite consensus disorder prediction 1 20 - -
Acco05g2302 401 Pfam tify domain 270 302 IPR010399 -
Acco05g2302 401 MobiDBLite consensus disorder prediction 362 401 - -
Acco05g2302 401 SMART tify_2 268 303 IPR010399 -
Acco05g2302 401 MobiDBLite consensus disorder prediction 240 267 - -
Acco05g2302 401 MobiDBLite consensus disorder prediction 383 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2302 Acco-ChrAcco05 38964406 38968682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2302 6 370 Tify Gene Family AT4G32570 37.629 1.41e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco05g2302 tify 4.4e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2302 05 38964406 38968682 Acco10g2039 10 32852021 32856154 CCT