Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2298 ATGCATCGATATCAACTGTTCATTAAACTCTCTTGGCAGTTAGTTGGCAAATTAATCAGTTTAATGAAATTTTCTGAGTGGCTTGAGTACATCAAGATGGAAAATTATCACGGAACTGAGTATCCATCTCATAAGGACCCTGAGAGTCTTGGAACAGCTCATAAGGAGTGGGATGATAAGGATCTTGAATTGCAGGCTGACATGGATCGATTCGTTGATGATGGATCTCTTGATGACAATGTTGAGTCTTTTTTATCCCATGATGATACGGACCCTAGAGATGCTGTTGGTCGTTCTATGGATATAAGCAAAGGCTTGTTCTCATTTTCCGAAGTCAATTCTGTACGAGCTAGTTCAAGCAAACTTGTCTGTTGCCACTTCTCATCTGATGGGAAATTGCTCGCAAGTGGTGGCCATGACAAAAAGGCTGTCTTATGGTTCACAGATTCTCTAAAGCCAAAAGCTACTCTTGAAGAACATTCATCTTTAATAACTGATGTCTGTTTTAGTCCGAGCATGCACTATCTTGCCACGTCTTCATTTGACAAAACTGTCAGGGTTTGGGATGTTGACAATCCTGGATATTCACTTCGCACATTCACAGGACATTCTGCATCTGTTATGTCACTAGATTTTCATCCTAACAAAGATGACCTTATCTGCTCTTGTGATGGTGATGGTGAAATACGATATTGGAGCATAAATAATGGCAGCTGTACCAGAGTCTCTAAGGGTGGCACTGCCATGATGAGGTTTCAACCACGCATAGGGAGGTATCTTGCTGCTGCTGCGGAGAACGTTGTCTCTATTCTTGATGTGGAAACAAACACATGCCAATACTCATTACAGGGACATACAAAACCAATACATTATGTTTGCTGGGACCCTTCTGGGGAGTTTCTGGCATCAATCAGTGAGGACTCTGTCATGTCTTTGGAGCTTTGGAACATGGCTGAGCAAAAGACAGTGACTCTTTCAGCTCATGAAGGAGTAATTGCTTCCGTGGCTGTCTCAAATGTGACTGGTTTGGTTGCTTCAGCCAGTCATGATAAGTTTGTAAAGCTTTGGAAGTAA 1074 0.4199 MHRYQLFIKLSWQLVGKLISLMKFSEWLEYIKMENYHGTEYPSHKDPESLGTAHKEWDDKDLELQADMDRFVDDGSLDDNVESFLSHDDTDPRDAVGRSMDISKGLFSFSEVNSVRASSSKLVCCHFSSDGKLLASGGHDKKAVLWFTDSLKPKATLEEHSSLITDVCFSPSMHYLATSSFDKTVRVWDVDNPGYSLRTFTGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVSKGGTAMMRFQPRIGRYLAAAAENVVSILDVETNTCQYSLQGHTKPIHYVCWDPSGEFLASISEDSVMSLELWNMAEQKTVTLSAHEGVIASVAVSNVTGLVASASHDKFVKLWK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2298 357 Gene3D - 98 250 IPR015943 GO:0005515
Acco05g2298 357 Pfam WD domain, G-beta repeat 196 233 IPR001680 GO:0005515
Acco05g2298 357 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Acco05g2298 357 Pfam WD domain, G-beta repeat 116 146 IPR001680 GO:0005515
Acco05g2298 357 Pfam WD domain, G-beta repeat 320 357 IPR001680 GO:0005515
Acco05g2298 357 Pfam WD domain, G-beta repeat 152 189 IPR001680 GO:0005515
Acco05g2298 357 Gene3D - 251 357 IPR015943 GO:0005515
Acco05g2298 357 CDD WD40 119 357 - -
Acco05g2298 357 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 242 IPR001680 GO:0005515
Acco05g2298 357 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 157 192 - -
Acco05g2298 357 ProSiteProfiles Trp-Asp (WD) repeats profile. 157 192 IPR001680 GO:0005515
Acco05g2298 357 SMART WD40_4 150 189 IPR001680 GO:0005515
Acco05g2298 357 SMART WD40_4 193 233 IPR001680 GO:0005515
Acco05g2298 357 SMART WD40_4 318 357 IPR001680 GO:0005515
Acco05g2298 357 SMART WD40_4 275 316 IPR001680 GO:0005515
Acco05g2298 357 SMART WD40_4 108 147 IPR001680 GO:0005515
Acco05g2298 357 ProSitePatterns Trp-Asp (WD) repeats signature. 176 190 IPR019775 -
Acco05g2298 357 ProSiteProfiles Trp-Asp (WD) repeats profile. 325 357 IPR001680 GO:0005515
Acco05g2298 357 PRINTS G protein beta WD-40 repeat signature 176 190 IPR020472 -
Acco05g2298 357 PRINTS G protein beta WD-40 repeat signature 344 357 IPR020472 -
Acco05g2298 357 PRINTS G protein beta WD-40 repeat signature 134 148 IPR020472 -
Acco05g2298 357 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 325 357 - -
Acco05g2298 357 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 200 238 - -
Acco05g2298 357 ProSiteProfiles Trp-Asp (WD) repeats profile. 115 146 IPR001680 GO:0005515
Acco05g2298 357 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 311 357 IPR044716 GO:0003714
Acco05g2298 357 SUPERFAMILY WD40 repeat-like 108 356 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2298 Acco-ChrAcco05 38922081 38929117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2298 172 356 Miscellaneous Gene Families AT5G08390 26.316 2.28e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2298 05 38922081 38929117 Acco10g2028 10 32801595 32814704 CCT