Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2293 ATGGAGGAGAATGAACAGCATACAAGTAGTGGATTAATGAGTTCCGGCGAGAGTCGTCCTCCGAATCCGTTCGCTGCCGAATACCGACAATGCCTCAGCACCGACCGTGAGGCGGCACCAAGTAAGAGGTCCCTTGTTCGGCACCCTTCTCTTATGAAGACAAAGGTGTCTGAAGTCTCTGCTGAGCCAGAACATGTCATTGAAGATTGCAAGTCTGAGTTCCTACCAAACCTTCGTTCTGGAGCATGTGCTGATATTGGGTTCCGTTCAAGCATGGAAGACGTGTATTTGTGCGTGGACAACTTTTTGCCTGATTTTGGACCCAAGAACCACATAGACGGACCCAGTGCATTTTATGGGGTCTTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGTCATCATTTGCCAAAGTTTATTGTTGAGGACGAAAGCTTTCCGAGTGATATTGAAAGGATTGTTGCATCAGCATTTTGGCAGACAGACAATGCTTTTGCTGAAGCTTGTTTGCTTGATGCTAACCTTGCATCTGGCACCACTGCTCTGGCTGCTCTTGTCATTGGAAGGTTGTTGTTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGTCGTCGTGGAAAAGCTATTGAAATGTCAAGGGATCACAAACCAACGCAGAGCAAAGAGAAGAAGCGCATTGAGGCATCGGGAGGTTATGTGTGTGATGGGTATCTCAATGGACAGCTCAATGTAGCCCGTGCTCTAGGTGATTGGCACATGGAAAGAATGAAAGTCCGAGATGGTGGACCTCTCAGTGCAGAGCCTGAATTTATGACCGCAAATCTGACTGAAGAGGATGAATTTCTCATCATGGGCTGTGATGGGATTTGGGATGTTTTTAGGAGCCAAAATGCTGTGGATTTTGCTAGGCGAAGGCTTCAAGAGCATAACGATCCAGCCAGGTGTAGTAAGGATTTGGTTGATGAGGCTTTGAAGAGAAAGAGTGGAGACAATTTAGCTGTGGTTGTGGTCTGCTTCCAGCAGCAGCCTCCGCCTAACTTGGTGGCACCGCGTTCTAGAGTGCACAGGAGCTTCTCTGCCGAAGGCTTGAGAGAGTTGCAAAGCTTCCTGGATAGTTTGGGTAATTGA 1137 0.4785 MEENEQHTSSGLMSSGESRPPNPFAAEYRQCLSTDREAAPSKRSLVRHPSLMKTKVSEVSAEPEHVIEDCKSEFLPNLRSGACADIGFRSSMEDVYLCVDNFLPDFGPKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVEDESFPSDIERIVASAFWQTDNAFAEACLLDANLASGTTALAALVIGRLLLVANAGDCRAVLCRRGKAIEMSRDHKPTQSKEKKRIEASGGYVCDGYLNGQLNVARALGDWHMERMKVRDGGPLSAEPEFMTANLTEEDEFLIMGCDGIWDVFRSQNAVDFARRRLQEHNDPARCSKDLVDEALKRKSGDNLAVVVVCFQQQPPPNLVAPRSRVHRSFSAEGLRELQSFLDSLGN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2293 378 FunFam Probable protein phosphatase 2C 22 62 345 - -
Acco05g2293 378 Pfam Protein phosphatase 2C 81 334 IPR001932 -
Acco05g2293 378 SUPERFAMILY PP2C-like 72 344 IPR036457 -
Acco05g2293 378 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Acco05g2293 378 CDD PP2Cc 79 342 IPR001932 -
Acco05g2293 378 Gene3D - 57 346 IPR036457 -
Acco05g2293 378 MobiDBLite consensus disorder prediction 1 28 - -
Acco05g2293 378 PANTHER PROTEIN PHOSPHATASE 2C 62 340 IPR015655 GO:0004722|GO:0006470
Acco05g2293 378 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Acco05g2293 378 SMART PP2C_4 69 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2293 Acco-ChrAcco05 38879532 38882120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2293 14 378 PP2C-type Phosphatase Gene Family AT2G25620 70.370 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Acco05g2293 PP2C 5.5e-70 CL0238