Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2289 ATGTGGAAGACTTCTCTCTTCTTCTGTCACTGTCTACTTCTGCTCATCCACCCCTCCGACGCCGACGTGGGCACGGCAGCCCATTACGGCCCTCCATTTCTACCGACGGCGTGTTTCGGAGCAGAGGCGTCGGAGTTCCCGTCGAGCAACATGTTTGGATCGGCGGGGGAGGGAATATGGGACAATGGGGCGGCGTGCGGCAGACAGTACGAGGTGAGGTGTATAAGTGCGGCGGCGCCCAGGACATGCATTGCAGGTCAGACCATTCAGATTAAGATTGTGGACAGAGCCCTCTCCTCTCGTTCTCGTCCTTCCTCCGATGCCACCTCCATGGTCCTCTCCGCCACCGCCTTCCGTGCCATCGCCAACTCCTCCGCTTCCCTCATCAACATCGAATTCCAACAGTACTCCCTCCCTCCCTCTCTCTTCTCTACTATAGCTGTGTGTTTGTTTTGA 456 0.5724 MWKTSLFFCHCLLLLIHPSDADVGTAAHYGPPFLPTACFGAEASEFPSSNMFGSAGEGIWDNGAACGRQYEVRCISAAAPRTCIAGQTIQIKIVDRALSSRSRPSSDATSMVLSATAFRAIANSSASLINIEFQQYSLPPSLFSTIAVCLF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2289 151 CDD DPBB_EG45-like 22 134 - -
Acco05g2289 151 Gene3D - 21 135 IPR036908 -
Acco05g2289 151 SUPERFAMILY Barwin-like endoglucanases 9 137 IPR036908 -
Acco05g2289 151 Pfam Lytic transglycolase 59 132 IPR009009 -
Acco05g2289 151 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 24 135 IPR007112 -
Acco05g2289 151 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 7 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2289 Acco-ChrAcco05 38845425 38845966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2289 1 135 Expansin Gene Family AT2G45110 25.850 8.94e-06 42.4