Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2288 ATGAAGTACGTCCTACTTCACACTGTTGAGGGGTCCATTATGCCAAGAAAGACGACAAGCGGATTTCTGTTCCGTGGTTCCCTGCACTTTCGCTCACTGCACATAGCACGACAGTCAAACTGGTCAAAACAAGTCGTCGTTTTGTTCATTCATGCTCCCCTGGACTCGTGTCACGTAAATGGCGCATCTGCAAGCTGTAATCCTACGATTATCATTTGGATTATCGTTATTTCTGCTATGGCAATCAAGAATGAGCCATTTCACGGCATTGTCCATGATGTCAAACGAAGAGCTGCTTGCTATAAACAAGATTGGACTGGCGCATTCTGTTCTGGCGTAAAGATATTGGCCCCAACTTTCTACATGTTCTTCGCTTCTGCTCTCCCTGTCATTGCATTTGGAGAACAACTTAATAAGGATACAGACGGAAGCTTGAGCTCTGTGGAAACATTAGCATCAACTGCTATTTGCGGAATTATCCACTCCATATTTGGTGGACAGCCTTTGTTGATTTTGGGGGTTGCTGAACCCACTATTATAATGTATGGTTATCTGTACCAGTTTTGCAAAAAGAGGCCAGAGTTAGGTGCTAATCTGTTTCTGGCTTGGGCCGGTTGGGTCTGTGTCTGGACTGGACTCATGTTGATTCTCTTGGCAATTTTCAATGCTTGCTCAGTTATCACTAGGTTTACTAGAATTGCTGGGGAATTATTTGGCATGTTAATTACTGTCCTATTCTTTCAACAAGCCATAAAGGGACTAATAGGCGAGTTTGGTGTTCCCAAGGATGTAGATCCATCTGCGCAGGAATTTCAATTCCAATGGCTGTATACAAATGGATTGCTTGCCACCATTTTTGCTTTTGGGTTACTTATCACTGCCATAAAAAGTAGAAGAGCAAGATCATGGCCATATGGAACTGGATGGCAACGAGGTCTCATTGCAGATTATGGAGTTCCATTGATGGTTGTTTTATGGACTCTGTTATCTTATCTTGTACCAAACAAATTGCCAGATGGAGTTCCTAGAAGGCTGTATTGTCCCCTTCCTTGGGAATCTGTGTCTCTGTACCACTGGACAGTTGTGAAGGATATGGTGAAGATACCTGTGGTTTATATTTTTGCTGCAATTGTTCCAGCTGTGATGATAGCAGGATTGTACTTCTTTGATCATAGTGTAGCCTCCCAGCTGGCTCAACAGAAGGAGTTCAACCTTCAAAAGCCATCAGCCTACCACTATGATATGTTTTTGCTTGGAATTTTGACTCTTATTTGTGGTCTTCTTGGGCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCGCCAATGCATACGAAAAGTCTGGCAGTTCTTAATAGGCAGTTGATCCGAAAGAAGGTGGTACAGAGCGCCAAAGAATGCATTAAGTACCAAAGGAGCACCTCTGAGTTATATGGAAAGATGCAAGCAGCGTTCATAGAAATGGACACCGCCCCTACAGATAAGGAGTTGGAAACTTTAAAGGAGGCTGTAACGAAACATGAAGATGAGGATGGTGAAAAAGGCAAATTTGATCCTGAGGTACACATAGATGCCTATTTGCCAGTTAGAGTAAACGAGCAAAGATTAAGCAATGCCTTGCAGTCACTCCTTGTGGGGGCATCAATTTTTGGCATCCCTATCATCAAAAGGATTCCAACCTCTGTTCTTTGGGGATATTTTGCTTATATGGCCATTGATAGTCTTCCAGGGAACCAATTCTGGGAAAGGATTCTGCTTCTCTTCATCACTCCAAGCAGGAGATACAAAATATTGGCAGGTTCTCATGCTTCATTCGTGGAGTCAGTTCCCTTCAAGAGCATAGCTGCATTCACAGTGCTGCAGCTTGTTTATTTGGCGGTGTGCTGGGGAGTGACATGGATCCCAATAGGTGGAATATTGTTTCCACTCCCTTTCTTTCTTCTCATTTGCATTAGAGAGCATTTGCTTACCAAGTTATTCGATCCCGGCCATCTTCAGGAGCTAGATGCTTCTGAATACGAGGAAATTGCTGGTGATCCACTTGTTTCCCGTACTATATCCCTTGTGGACAAGGTTTCGCTTGATGCTGATGGTGATAAAGGTTCTGAAGACATCTATGATGCTGAGATGTTGGATGAGATGACAACCAGCAGGGGAGAGGTGAAACTCAGAACTGTAAGCTTCAACGGTAGAAATCTGAGCTTCAACGCTTCAACGGTAGAAACCACAGCTTCATCGAAGACAGACATTGTTAGGTATAAAGTTCTGCAGGGGTTTGTTGGGGTTTTGATATAA 2292 0.4346 MKYVLLHTVEGSIMPRKTTSGFLFRGSLHFRSLHIARQSNWSKQVVVLFIHAPLDSCHVNGASASCNPTIIIWIIVISAMAIKNEPFHGIVHDVKRRAACYKQDWTGAFCSGVKILAPTFYMFFASALPVIAFGEQLNKDTDGSLSSVETLASTAICGIIHSIFGGQPLLILGVAEPTIIMYGYLYQFCKKRPELGANLFLAWAGWVCVWTGLMLILLAIFNACSVITRFTRIAGELFGMLITVLFFQQAIKGLIGEFGVPKDVDPSAQEFQFQWLYTNGLLATIFAFGLLITAIKSRRARSWPYGTGWQRGLIADYGVPLMVVLWTLLSYLVPNKLPDGVPRRLYCPLPWESVSLYHWTVVKDMVKIPVVYIFAAIVPAVMIAGLYFFDHSVASQLAQQKEFNLQKPSAYHYDMFLLGILTLICGLLGLPPSNGVLPQSPMHTKSLAVLNRQLIRKKVVQSAKECIKYQRSTSELYGKMQAAFIEMDTAPTDKELETLKEAVTKHEDEDGEKGKFDPEVHIDAYLPVRVNEQRLSNALQSLLVGASIFGIPIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILAGSHASFVESVPFKSIAAFTVLQLVYLAVCWGVTWIPIGGILFPLPFFLLICIREHLLTKLFDPGHLQELDASEYEEIAGDPLVSRTISLVDKVSLDADGDKGSEDIYDAEMLDEMTTSRGEVKLRTVSFNGRNLSFNASTVETTASSKTDIVRYKVLQGFVGVLI 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2288 763 Pfam HCO3- transporter family 528 619 IPR011531 GO:0006820|GO:0016020
Acco05g2288 763 Pfam HCO3- transporter family 279 454 IPR011531 GO:0006820|GO:0016020
Acco05g2288 763 Pfam HCO3- transporter family 86 257 IPR011531 GO:0006820|GO:0016020
Acco05g2288 763 Gene3D Helical hairpin bin 97 139 - -
Acco05g2288 763 PANTHER ANION EXCHANGE PROTEIN 83 676 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2288 Acco-ChrAcco05 38836974 38841416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2288 86 726 Antiporters AT4G32510 67.791 0.0 915
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2288 05 38836974 38841416 Acco10g2017 10 32707976 32720077 CCT
Acco05g2288 05 38836974 38841416 Acco05g2288 05 38836974 38841416 ECH
Acco10g2017 10 32707976 32720077 Acco05g2288 05 38836974 38841416 ECH