Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2281 ATGGATTCTCCTGATGTTACGAAGAAAACCCCTATTTCCATCGCCACTGCCGATGCTGCAGCTTCTTCTGAATCTCCTCCTGTTCAAGAGTCCCCCTTTTTCAGCTTTGTAAACAATTTATCTCCAATAAAGTCTGTCAAGGCTTCTCGTGTTGCTCAAGATTTCCTGGGACTAAATTCTCCCCCTGTCGTCTTCACGTCACCACGTATTAATCCCCATCGGGGATCCAAGTTCTTGGAGAGGCCTCAATGCTCTCAACTAGCCAATGTAGAAATTTCTCGAAGTGTCAATGAAGTCAAGAGCTTTGCTGATAATCCTGTTGACCCTGACAAATCTACTTCTCTATCGCCGGGATTTATAACTCATAGCAAGAGTTATTCAAATACTCAGCACTGCAACTCTTCACCGTGTGTGGAGTCTGTAGATGAATATTTAGCTGATCCTTCAGATATTGATCATACGTCTTCGGAACATTCAGTCAACCCCGACGTGAAACAATACAATGAGAATGCTGGATCATCACTAAATGACTTAACTCACGCAAAGAAAGCCATATCAATAGACGATAACAAAAATGGTCCTGGTAACAAGAGGAACGAACCTTTGCTTTTGTTAGAGGAGTCTGAAGTCAGCTACCAAGAAGAGCCAAAACTAGTTGATGAAGCAGGGGAGAAAGCTGTTGACTTGCCTTCAGAAGAATGTGCTAAGTTAGAGTCTCTTTTGTCTGCTGACCATGTTTTTGAGAAGGAACGTTCTGATGATTCAGTTGTCCAGTGCACTGGAAATGAAATGCAGGATCATCGTGATTGTACCTCTCAGTCGATGCTTGAGTCTTTGCTGGATGTAAAAGAATGTGAAGATGGAGGCGAGATGGGTACAATCTCTTGTATAAGTGTGCAGAACATGTCACAGGACAGCACCAAGGCCAGCCAAAAGCACCGAGGCCTGCGAAGACGCTGCCTTCAGTTTGAGGAGGCCGTGTCAAGTAAATTTGGAAATTTGAATAGCCTCCCGCTTCAAGCCCATGTTCCCGAAGACTTAACACCATCAGCTAACTCCTCAAAGTCAAAAGATTTAGAAGCTTCTCATGTTGCTCTGAACGACACTACAAGTGAAGAGAGAATGGTCAAGGAGTCCAAACCTATCGCTACCACAGTTTCTCCACGGTGTAGTGGAAGTTTTCCTGTGAAATGTTCCAAGCCATCAGGTATCGGGTTGCACTTGAATAGCGTTATAAATGCTATGCCCCATGGCCGTGCTGCATTTACAGGCATTAGACTAGCAGAGGGTTGTACAGGTTCACAACGCGGGAAGTCAGTTACTTTACTAAGCTGCGGGAATGCTGAGGACTTAACGAGGGGCTTAATTTCATCGAAGATGGACGAGCAACCTTTAGTTGGCAAAATATGTGAGAGGCACGAAAGGAATGCTTCAATATCTACGGATTCTCGTCCCTCTGAGTCTCCAAGCTCCCTAGAACCTGCAAATTTGTCAATTCTTGTTGAGCATCCAGCGAGTTTTCTAGATGAGAGAAAATTAAGCTCTGTAGGTGATGGAAAATTTGAGGATTCCAATCAAACAAGCCCCAAAAAGAAAAAGAAGAAAACATCGAACCCCACTGATGATGACGGTTGTAAAAGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTACTGTGATTGTTTTGCAGCCGGATTATTTTGTGCTGAGTCTTGTGCTTGTCAAGACTGCTTCAATAGACCAGAACATGGAAATTTGGTTCTTGAGACAAGGCAGCAAATAGAAACCCGTAACCCCCTTGCATTTGGCCCCAAGATTGTGCAGCATGTTACTGACTTTCCTTCAAGTAATATGGACGATACCAATATAACGACACCATCATCGGCGAGACATAAAAGAGGTTGCAACTGCAAAAAGTCAATGTGCCTGAAAAAATACTGTGAATGTTATCAGGCTAATGTCGGATGCTCCAGTGGATGTCGATGCGAGGGATGTAAAAATGTCTATGGCAGGAAAGAAGAATTCGCTACCATTGAACATGCTTTGAGTGAAGAAAGGAGAAACAGAGCAGAAGAAGGATCAAATAGCACTCTTCACAGAGAGCTGGAAATTGAGGCAAAGAAGACGGAGTTATTACGCGGAGAGTTGTATGATCTGCACTGCCTTTCTCCTCTAACACCTTCTTTGCAATACTCAGACCAAGGAAAACAAGCTGCAAACGTACGAGCTCCTTCTGGGAAATATCTTCCGGCCACAGAGATAAGAAATGCCTCTTGTGATTGGCCACAAGATGGCAACATAGAAATAACGGATCAATCACCGCCAAGATTTAACTCCGTTGCCCAAGCAGGCCAGCATACAATTTCTCATTCTCAGTCAATTTCTAGTGCTTCATTGTCAACCAAATCAAGGGATCAGACACATATTCCCCGTGTTCTATCCGGCGGTTCCCTTCGTTGGCGTACTTCACCAATCACCCCAATGACTAAATTAGGTGAAACTAAATCTCTACAGTGTCTTGAATCAAATAGCAGACTTTATGACATTCTAGAAGACGAAACTCCTGAGATGTTGAAGGAAGCTTCGACTCCCATTAAGTCTGTGAAAACAAGTTCCCCTAAGCTGAAGCGAGTATCTCCTCCTCACGGTCATCTACGTGAACTTGGTTCAGGCTCTTCAGAAGGCTTGAGAAGTGGCCGGAAATTTATATTGAAAGCTGTACCTTCGTTCCCACCACTGACCCCATGTATTACTTCGAAAGCCAATGGTCATGAGAATTCAGAGAATAGCAAGCAAGTGACCGACGATCCCAAAAACTGA 2823 0.4371 MDSPDVTKKTPISIATADAAASSESPPVQESPFFSFVNNLSPIKSVKASRVAQDFLGLNSPPVVFTSPRINPHRGSKFLERPQCSQLANVEISRSVNEVKSFADNPVDPDKSTSLSPGFITHSKSYSNTQHCNSSPCVESVDEYLADPSDIDHTSSEHSVNPDVKQYNENAGSSLNDLTHAKKAISIDDNKNGPGNKRNEPLLLLEESEVSYQEEPKLVDEAGEKAVDLPSEECAKLESLLSADHVFEKERSDDSVVQCTGNEMQDHRDCTSQSMLESLLDVKECEDGGEMGTISCISVQNMSQDSTKASQKHRGLRRRCLQFEEAVSSKFGNLNSLPLQAHVPEDLTPSANSSKSKDLEASHVALNDTTSEERMVKESKPIATTVSPRCSGSFPVKCSKPSGIGLHLNSVINAMPHGRAAFTGIRLAEGCTGSQRGKSVTLLSCGNAEDLTRGLISSKMDEQPLVGKICERHERNASISTDSRPSESPSSLEPANLSILVEHPASFLDERKLSSVGDGKFEDSNQTSPKKKKKKTSNPTDDDGCKRCNCKKSKCLKLYCDCFAAGLFCAESCACQDCFNRPEHGNLVLETRQQIETRNPLAFGPKIVQHVTDFPSSNMDDTNITTPSSARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNVYGRKEEFATIEHALSEERRNRAEEGSNSTLHRELEIEAKKTELLRGELYDLHCLSPLTPSLQYSDQGKQAANVRAPSGKYLPATEIRNASCDWPQDGNIEITDQSPPRFNSVAQAGQHTISHSQSISSASLSTKSRDQTHIPRVLSGGSLRWRTSPITPMTKLGETKSLQCLESNSRLYDILEDETPEMLKEASTPIKSVKTSSPKLKRVSPPHGHLRELGSGSSEGLRSGRKFILKAVPSFPPLTPCITSKANGHENSENSKQVTDDPKN 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2281 940 ProSiteProfiles CRC domain profile. 544 671 IPR005172 -
Acco05g2281 940 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 19 921 IPR044522 GO:0003700
Acco05g2281 940 MobiDBLite consensus disorder prediction 517 544 - -
Acco05g2281 940 MobiDBLite consensus disorder prediction 782 822 - -
Acco05g2281 940 MobiDBLite consensus disorder prediction 862 898 - -
Acco05g2281 940 MobiDBLite consensus disorder prediction 910 940 - -
Acco05g2281 940 MobiDBLite consensus disorder prediction 782 811 - -
Acco05g2281 940 MobiDBLite consensus disorder prediction 1 29 - -
Acco05g2281 940 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 546 581 IPR005172 -
Acco05g2281 940 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 634 668 IPR005172 -
Acco05g2281 940 SMART CXC_2 631 672 IPR033467 -
Acco05g2281 940 SMART CXC_2 543 584 IPR033467 -
Acco05g2281 940 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2281 Acco-ChrAcco05 38773066 38777806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2281 523 674 CPP Transcription Factor Family AT3G22760 61.438 3.75e-59 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Acco05g2281 TCR 3.9e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2281 05 38773066 38777806 Acco05g2281 05 38773066 38777806 ECH