Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2278 ATGCAGGAGACGGATCAGACCACCACAAACTCTCTGCCTTCTAGCAGTGAAAAATCATCCAGTTCTGCGCTCCACCTCGATGTTAAAGAAGGACCAGAGAGCGATGAGGAGATCAGAAAGGTACCGGAGTTGGGCGGTGAATCCGCCGGAACGTCAGTTTCCCGACCGGAAACCTCTGGAGGAGTGGTTGAGGGGAGAGGAGAGAATCAGAGGAAGAGAGGCAGAAACGCTGCCGACAAAGAAACCAAGCGCCTCAAGAGGTTGCTGAGGAACAGAGTTTCGGCTCAGCAAGCAAGAGAGAAGAAGAAGGCATACCTGAATGATTTGGAAACAGGGGTAAAAGACTTGGAGAAGAAGAATACGGAACTAGAAGAGAGATTATCCACTTTACAGAACGAGAATCAAATGCTAAGACATATACTGAAGAACACCACTGCAAGCAGAAGAGGAGGCAGTGGCGGTGCAAATGAAGGAACTTTATGA 483 0.4886 MQETDQTTTNSLPSSSEKSSSSALHLDVKEGPESDEEIRKVPELGGESAGTSVSRPETSGGVVEGRGENQRKRGRNAADKETKRLKRLLRNRVSAQQAREKKKAYLNDLETGVKDLEKKNTELEERLSTLQNENQMLRHILKNTTASRRGGSGGANEGTL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2278 160 MobiDBLite consensus disorder prediction 1 101 - -
Acco05g2278 160 MobiDBLite consensus disorder prediction 1 22 - -
Acco05g2278 160 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 154 IPR044280 GO:0000981|GO:0045944
Acco05g2278 160 MobiDBLite consensus disorder prediction 28 43 - -
Acco05g2278 160 Pfam bZIP transcription factor 80 140 IPR004827 GO:0003700|GO:0006355
Acco05g2278 160 FunFam Transcription factor HY5 102 143 - -
Acco05g2278 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Acco05g2278 160 PRINTS cAMP response element binding (CREB) protein signature 116 133 - -
Acco05g2278 160 PRINTS cAMP response element binding (CREB) protein signature 78 94 - -
Acco05g2278 160 PRINTS cAMP response element binding (CREB) protein signature 96 116 - -
Acco05g2278 160 PRINTS cAMP response element binding (CREB) protein signature 9 24 - -
Acco05g2278 160 Gene3D Single helix bin 102 143 - -
Acco05g2278 160 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Acco05g2278 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Acco05g2278 160 SUPERFAMILY Leucine zipper domain 83 141 IPR046347 GO:0003700|GO:0006355
Acco05g2278 160 CDD bZIP_HY5-like 84 135 - -
Acco05g2278 160 MobiDBLite consensus disorder prediction 66 101 - -
Acco05g2278 160 Coils Coil 78 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2278 Acco-ChrAcco05 38747719 38748642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2278 23 140 bZIP Transcription Factor Family AT5G11260 68.293 1.41e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco05g2278 bZIP_1 9e-14 CL0018