Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2272 ATGTTGGTGCTTCTTCTGTGTGTGTCAGCTAGCTTGCTTGTAGAAGCTAGTTCAGGCTCTATGATAGACCTTACAACTTTCTCTTTCGCGTCTTTTAGCCCCGAAACTTGCAGCAGCGGAGAGCTTATGTGCATGGGGTCTGCGACATCAGGCGAGGGCCATTTGAGGCTGACTCCTGAGCCGTGGATCAATTCAAGTTTGCCGGGGTCGTCGGCGATGAACAAGGTTGGAAGGGTATTGTACCCTCAAAGGGTTAGAGCGTGGCCTGCCTTAATCAGCACTTCCTTCACTATGAGGATCAATCCCATGGATAATAATTCAAACATCTCTGGTGATGGTCTTACTTTTTTTTTTGCAAGTAATCAGAACCCCTCACCACCTTCTAGCTACGGCTCTTATTTGGGCTTATTTGATCATTCTACTCAAGGTGAATCTTTGCAACAAATAGCTGTTGAGTTTGACACATTCAAGAATGAGTTTGATCGAGATGAAAACCACGTTGGGGTAGTCACAGGAAGCATTATAAGTCCAGTTGCTACAGAGAGTCTAAATCCCGTTGGGATTAAACTAAGCAGTGGACAACCTATTCAGGTTAAAATAGAGTACGATGGTTCCATTAACATGCTTTATGTCTCTCTCGGACACTCCGAAAGTACGTTAAGGAGCGTTCTTAACCTCACTCTTGATCTCCCAAATATTGTCCCAAACACAGTTTATGTTGGTTTCACAGCTTCCACGGGCAACACTTTGCCTGAAAGCCATGAAATCCTCAATTGGGTGTTCACTTCAGCTCCTCTGCCCTCATTATGTGCTAATAATAAACCCAGCAAGACCATTAAAACCATTCTGATCATTGTCATACCCATTTTTCTTCTGGCCATATTGGCAAGCTCATTTCCATTTATCTGGAAAACCATTAAGAAAAGGAAAAAGAAGATTGATAAGAGGGGGGATAATAATAGGCAACATGTTATAGATCAATGCACATCAATAGCTGCTCCAGATATCCCCAAAGAGTTCACTTTCAAGCAATTGTATATGGCTACAAGCAGCTTCAGGAAGGAGAATCTTTTAGGAAGAGGTGGATTTGGCAGTGTTTATAAAGGCCTCCTATTTAATCCCGCAAAAACCATAGCAGTCAAGAAGATTTCAGCAAATTCAAACCAAGGTGAAAAAGAGTATTTTGCTGAAATATGCACCATAGGCCGACTTAGGCACAAGAACATAGTACAGCTACTAGGGTGGTGCCATGAAGACGAATATCTACTCTTGGTATATGACTACATGCAAAATGGAAGTTTAGATCAATTCATAGGCAAGGACATTCTGAACTGGCAAACAAGGCACAAGATATTAGTAGGACTTGCGTCAGCATTACTCTACCTTCATGAAGACTGTGGAAACCCAGTTGTTCACAGAGATGTTAAACCAAACAATGTAATGCTAGACTCAGATTTCAACCCTCATCTTGGAGATTTTGGCCTTGCAAGGTTGCTGTATAATGAAGAATCAGTAATCACAAACCTAGCAGGAACTCCTGGATATTTGGCTCCAGAAATAGGTTTCACAGGAAAAGCCACACCAGAATCAGATGTTTACAGTTTTGGGATGGTAGTGCTTGAAGTTATATGTGGAAGAAGATCAACAAAAGGCAACACAGAAGATAATTACAGTTTGGTGGACTATGTTTGGAACATGCATAGCGAGAATGCTTTGATGGAGTGTGTGGACGCGCTTTTAGGAGACGAGTTTGACGAGGAAGAAGTTAGAAGGGCGTTGATGGTTGGATTGGCTTGTTTGTCTCCAGATCCTATGTTTAGACCAAAAATGAGAAAAGTGGTGCATATTTTGCTAGATCCAAACGAGCCTTTAATGGAGTTACCAATGGTTAAGCCTCTTGGAGTTTATGTGTCAATTTCTTCTTCTACTTCAAGAACCTCTAACTTTGGCTCCACCAGAGGTCATTCGCATCAGCTTCTTCACTCGCGAACAACATCATTAGAGGAGATTTCAATTGTGTACGATCAACAGTTCAGTGAGTTTGCTAGCCCCTGTTAG 2058 0.4203 MLVLLLCVSASLLVEASSGSMIDLTTFSFASFSPETCSSGELMCMGSATSGEGHLRLTPEPWINSSLPGSSAMNKVGRVLYPQRVRAWPALISTSFTMRINPMDNNSNISGDGLTFFFASNQNPSPPSSYGSYLGLFDHSTQGESLQQIAVEFDTFKNEFDRDENHVGVVTGSIISPVATESLNPVGIKLSSGQPIQVKIEYDGSINMLYVSLGHSESTLRSVLNLTLDLPNIVPNTVYVGFTASTGNTLPESHEILNWVFTSAPLPSLCANNKPSKTIKTILIIVIPIFLLAILASSFPFIWKTIKKRKKKIDKRGDNNRQHVIDQCTSIAAPDIPKEFTFKQLYMATSSFRKENLLGRGGFGSVYKGLLFNPAKTIAVKKISANSNQGEKEYFAEICTIGRLRHKNIVQLLGWCHEDEYLLLVYDYMQNGSLDQFIGKDILNWQTRHKILVGLASALLYLHEDCGNPVVHRDVKPNNVMLDSDFNPHLGDFGLARLLYNEESVITNLAGTPGYLAPEIGFTGKATPESDVYSFGMVVLEVICGRRSTKGNTEDNYSLVDYVWNMHSENALMECVDALLGDEFDEEEVRRALMVGLACLSPDPMFRPKMRKVVHILLDPNEPLMELPMVKPLGVYVSISSSTSRTSNFGSTRGHSHQLLHSRTTSLEEISIVYDQQFSEFASPC 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2272 685 FunFam Lectin-domain containing receptor kinase A4.3 429 638 - -
Acco05g2272 685 SMART serkin_6 352 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2272 685 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Acco05g2272 685 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Acco05g2272 685 SUPERFAMILY Protein kinase-like (PK-like) 337 642 IPR011009 -
Acco05g2272 685 Pfam Legume lectin domain 26 264 IPR001220 GO:0030246
Acco05g2272 685 Gene3D Transferase(Phosphotransferase) domain 1 429 624 - -
Acco05g2272 685 CDD STKc_IRAK 358 617 - -
Acco05g2272 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 266 IPR013320 -
Acco05g2272 685 ProSitePatterns Protein kinases ATP-binding region signature. 358 382 IPR017441 GO:0005524
Acco05g2272 685 ProSiteProfiles Protein kinase domain profile. 352 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2272 685 Pfam Protein kinase domain 353 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2272 685 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Acco05g2272 685 FunFam serine/threonine-protein kinase PBS1-like 319 428 - -
Acco05g2272 685 Gene3D - 22 278 - -
Acco05g2272 685 PANTHER - 59 619 - -
Acco05g2272 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2272 Acco-ChrAcco05 38705730 38709939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2272 75 636 Receptor kinase-like Gene Family AT5G10530 37.564 3.14e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco05g2272 Pkinase 1.2e-47 CL0016