Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2254 ATGTCTTCAATTCTCTCCATCTCTAGCCTTTCTCTACCTGGCTCTACTGTTATCTCTTCCTTCTCCCATATCGATTTTCCCGCCAAATCACAACGGTCGTCTTCGTCGACGCCCAAATTTCGTTCGCACAAGGCTGATGAGTTCGCCGCAGGCCACATCGCCTTATCTGCCCCAGCTAGCGGAAGGAGAGGGCTGCTATTTATAGCCACACTTCCATGTCTTCTTCCTTTAACTCAAATCATGGGTTGCCATGGAGCACATGCAATTGAGTCAGGTACAAGGGAATATGTGCTCATAAAAGAAGAGGTCCGCAAGGTATTGTCGAAGGGAAAGGCAGCAGGTGTGCTTCGTCTGGTTTTCCATGACGCTGGGACCTTTGAAATGGATGATAATACTGGTGGCATGAATGGTTCTATAGTCTATGAACTTGATAGACCTGAAAATTCTGGGCTGAAAAAATCTATAAAGGTTCTGCAAAAGGCAAAGACTCAAATAGATGCTATAAAACCAGTATCATGGGCAGACATGATTGCTGTCGCTGGAGCTGAAGCGGTTGCTGTATGTGGAGGACCAAAGATCCAGGTTTCAGTGGGCAGGCTAGATTCATTGGAGCCTGACCCGGAAGGGAAACTTCCTGAAGAATCTCTCGATGCTTCTGGTTTGAAGAAATACTTCCTGAGAAAAGGCTTTTCAACACAAGAACTCGTGGCATTGTCTGGAGCTCACACGCTTGGAAGTAAAGGCTTTGGGAGTCCAATTTCTTTTGATAATTCATATTACACGGTTCTTTTGGAGAAGCCATGGATGTCTTCAGGCGGTATGTCAAGCATGATTGGCCTTCCTTCAGATCACGCACTTGTTGAAGATGATGAATGTTTAAGGTGGATTAAAAAATACGCGGACAATGAGAATATGTTCTTCGAAGATTTCAAGAATGCGTATGTCAAGCTGGTGAATACTGGTGTGAGTGACGGCTCCCCGTTAAATGTTTCAAATAAATCTATAGAGTTGGAGGCCGTTGTCAATAATGATGCATTTGGCATCGATGTAAATATTTCCCTCCATAAAGAAGCTGCCTTGGACAACTTCTGGGAAGATGTACAACAAGGCGCAGACTATGAAGATGCATTTGACAAACAAGGAAGTAGCCTTGAAAATGTGAGAAAGTGGGGCCAAACACGTGTCATTGACATGGGTGGTGGCATAAAATCTGATACCCCGATGAAGAACTCTCAGATCTATGTGCTTATTTAG 1254 0.4434 MSSILSISSLSLPGSTVISSFSHIDFPAKSQRSSSSTPKFRSHKADEFAAGHIALSAPASGRRGLLFIATLPCLLPLTQIMGCHGAHAIESGTREYVLIKEEVRKVLSKGKAAGVLRLVFHDAGTFEMDDNTGGMNGSIVYELDRPENSGLKKSIKVLQKAKTQIDAIKPVSWADMIAVAGAEAVAVCGGPKIQVSVGRLDSLEPDPEGKLPEESLDASGLKKYFLRKGFSTQELVALSGAHTLGSKGFGSPISFDNSYYTVLLEKPWMSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNTGVSDGSPLNVSNKSIELEAVVNNDAFGIDVNISLHKEAALDNFWEDVQQGADYEDAFDKQGSSLENVRKWGQTRVIDMGGGIKSDTPMKNSQIYVLI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2254 417 PRINTS Plant ascorbate peroxidase signature 170 188 IPR002207 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Plant ascorbate peroxidase signature 228 249 IPR002207 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Plant ascorbate peroxidase signature 298 322 IPR002207 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Plant ascorbate peroxidase signature 112 127 IPR002207 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Plant ascorbate peroxidase signature 130 140 IPR002207 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Plant ascorbate peroxidase signature 210 227 IPR002207 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Plant ascorbate peroxidase signature 189 201 IPR002207 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 Pfam Peroxidase 101 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 Gene3D - 100 321 - -
Acco05g2254 417 Gene3D Peroxidase, domain 2 212 314 - -
Acco05g2254 417 FunFam L-ascorbate peroxidase 102 219 - -
Acco05g2254 417 PRINTS Haem peroxidase superfamily signature 112 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 PRINTS Haem peroxidase superfamily signature 171 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 FunFam Adenylate/guanylate cyclase 212 314 - -
Acco05g2254 417 ProSitePatterns Peroxidases proximal heme-ligand signature. 234 244 IPR019793 -
Acco05g2254 417 ProSiteProfiles Plant heme peroxidase family profile. 112 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco05g2254 417 ProSitePatterns Peroxidases active site signature. 112 123 IPR019794 GO:0004601
Acco05g2254 417 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 95 323 IPR044831 GO:0004601|GO:0034599
Acco05g2254 417 SUPERFAMILY Heme-dependent peroxidases 98 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2254 Acco-ChrAcco05 38550384 38555986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2254 112 317 Peroxidase AT4G16270 31.818 6.00e-23 97.4