Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2253 ATGAAAAAAGCCTGGTCTTTCATCCATATCATCAGCGTCCTGTTCCTGTCTTATCTCCTCTTACCGGAAATCTGCCAGGCTGGCATTCAGAGCACCGGCACGATCCCTCCAGGGTTTCAAGGCTCTCAAATGACTTGGATTGACAAAAACGGCATGTTTCTCGTGTCAAACAATGGAAAATTCTTGTTTGGCTTCATCACTACCCCAAACGACAACTCGTTATATCTTCTGGCAGTCATCCACAGTAACAATAACCAAGTGGTTTGGACAGCAGACAGAGACCTCCCTGTTAGTAATTCTGATATGTTTGTCTTCGACAAGTCCGGTAATGTCTTTCTGCAGAAAGGAAACGTTGTCGCTTGGTCTACAGACACAAAGGGCAAAGGAGTTTCTTTGATGGAATTACGGGACACAGGAAACTTGGTGTTGCTTGCTGAAGATAATAGTACAATTTGGGAGAGTTTTGGGCACCCAACTGATACCTTATTGCCAATGCAAGAATTCAAAGAGGGAATGAAACTTACCAGTGAACCTGACCAAAATAACTTAACTTACAATCTGGAGATCAAGTCTGGTGATTTAGTTCTCTCTGCTGGTTTTCAAAACCCACAGCCTTATTGGTCTATGCAGAAAGATGACCGCAAAATCATCAATGAAGATGGTAACTTGGTGGCTTCAGCCTCCATTACTGCAAACTCATGGAGGTTCTATGATAAAAATAAATCTTTGTTATGGCAGTTCATTTTTGCTCAAGATTCATCATCAGGCACAAATTCCACTTGGGCTGCTGGTCTGGGAAGTGATGGTTTCATCACTTTCTCTGATCTCAATAGTGGAAGTTCAATTACTCCCTCACCAACAAAGATCCCAAAAGATTCTTGTAGCACACCTGAACCTTGTGGTCCCTATAACATATGTACGGATGATAACAAGTGTCATTGTCCTTCAGCTCTGAGATCTCATGCTAATTGCAATCCAGGGATTGTTTCTCCTTGTAATGGTGACTCAAATGGATCTGTAGAGCTTGTAGAAGGTGATGATGGACTTGGTTACTTCGTTCTTCAATTCCTTTCACCATCCTCCAAGACTGATTTGAACGGCTGCAAGTCTTCCTGCCTGGGAAATTGCTCATGTCTTTTGATGTTCTTCCACAGCAATTCAGGGAACTGTTACATGTTGGATAGGGTTGGAAGCTTTGAGAATTCTGGCACAAATTCTGGTTTTGTTTCTTACATAAAGGTCTCGAGTAACGGAGGATCTGGCTCTTCTGGGGGTGGAAGCAGCAAGAAGTACATTGTGGTGATTGTGGTTATTGTCATAGCAACTTTGCTTGTTATTTTGGGTTTGTGCTATGTGGGATTTAGATGCTACAGAAGGAAGCAAAAATTGCCTGAGTCTCCAAGAGGGAGTTCAGAAGAGGACAATTTCTTGGAGAATTTAACTGGTATGCCTGTCCGTTTTAGCTATAAAGACCTGCAAACAGCTACTAAGAACTTCTCTGAGAAGCTTGGGCATGGAGGTTTTGGCTCGGTTTATAAAGGTGTTCTACCAGATGGGACTCTTTTAGCTGTGAAGAAGCTAGAAAGCATAGGCCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCATCACCATTTGGTTAGGCTTAAAGGATTCTGTGCCGAAGGAACTCATCGCCTTCTTGCTTATGAGTTTATGGCCAATGGCTCACTGGATAAATGGATATTCAAGAAAAACGAAGGGGAATCCCTGTTGGATTGGGATACAAGGTTTAATATAGCTTTGGGCACAGCGAAAGGGCTTGCATACCTGCATGAAGATTGTCATTCAAAGATTGTTCATTGCGACATCAAACCAGAAAATGTTCTTCTTGATGAGAATTTCCTCGCCAAGGTTTCAGATTTTGGGTTGGCTAAACTCATGACTCGCGAACAAAGCCATGTTATCACAACACTGAGGGGAACCCGAGGATATCTTGCACCAGAGTGGATCACAAACTACGCTATATCAGAGAAAAGTGATGTATATAGTTACGGTATGGTGTTGTTAGAGATCATTGGTGGAAGGAAAAACTATGATCCTAATGAGTCTTCAGAGAAATCCCACTTCCCAACCTTTGCTTTCAAGATGATGGAAGAAGGGAAGTTGAAAGATCTTCTTGATTCAAAGTTGAGAATAAATGAAAATGATGAAAGGTTTCATATTGCCCTCAAAGTTGCATTGTGGTGCGTACAGGAAGATATGTCTCTGAGACCTTCCATGACCAAAGTTGTTCAGATGCTCGAGGGTCTTTGTACTGTTCCTAAGCCGCCACCATCTTCTCCCATGGGTTCCCGCCTTTTCTCGTCTTTCTTCAAATCCATGAGTGAAGGTGGCACCTCTTCAGGACCATCAGACTGTAACAGTGATGCATATCTTTCTGCAGTTAGGCTTTCAGGACCAAGATAA 2466 0.4258 MKKAWSFIHIISVLFLSYLLLPEICQAGIQSTGTIPPGFQGSQMTWIDKNGMFLVSNNGKFLFGFITTPNDNSLYLLAVIHSNNNQVVWTADRDLPVSNSDMFVFDKSGNVFLQKGNVVAWSTDTKGKGVSLMELRDTGNLVLLAEDNSTIWESFGHPTDTLLPMQEFKEGMKLTSEPDQNNLTYNLEIKSGDLVLSAGFQNPQPYWSMQKDDRKIINEDGNLVASASITANSWRFYDKNKSLLWQFIFAQDSSSGTNSTWAAGLGSDGFITFSDLNSGSSITPSPTKIPKDSCSTPEPCGPYNICTDDNKCHCPSALRSHANCNPGIVSPCNGDSNGSVELVEGDDGLGYFVLQFLSPSSKTDLNGCKSSCLGNCSCLLMFFHSNSGNCYMLDRVGSFENSGTNSGFVSYIKVSSNGGSGSSGGGSSKKYIVVIVVIVIATLLVILGLCYVGFRCYRRKQKLPESPRGSSEEDNFLENLTGMPVRFSYKDLQTATKNFSEKLGHGGFGSVYKGVLPDGTLLAVKKLESIGQGKKEFRAEVSIIGSIHHHHLVRLKGFCAEGTHRLLAYEFMANGSLDKWIFKKNEGESLLDWDTRFNIALGTAKGLAYLHEDCHSKIVHCDIKPENVLLDENFLAKVSDFGLAKLMTREQSHVITTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPNESSEKSHFPTFAFKMMEEGKLKDLLDSKLRINENDERFHIALKVALWCVQEDMSLRPSMTKVVQMLEGLCTVPKPPPSSPMGSRLFSSFFKSMSEGGTSSGPSDCNSDAYLSAVRLSGPR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2253 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 175 IPR036426 -
Acco05g2253 821 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2253 821 CDD STKc_IRAK 503 770 - -
Acco05g2253 821 Pfam D-mannose binding lectin 87 169 IPR001480 -
Acco05g2253 821 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 778 - -
Acco05g2253 821 CDD B_lectin 47 158 IPR001480 -
Acco05g2253 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Acco05g2253 821 SUPERFAMILY Protein kinase-like (PK-like) 479 768 IPR011009 -
Acco05g2253 821 Pfam Protein kinase domain 500 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2253 821 Gene3D Phosphorylase Kinase; domain 1 465 571 - -
Acco05g2253 821 FunFam Serine/threonine-protein kinase 41 156 - -
Acco05g2253 821 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Acco05g2253 821 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2253 821 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Acco05g2253 821 SMART blect_4 45 158 IPR001480 -
Acco05g2253 821 PIRSF SRK 5 817 IPR024171 GO:0004674
Acco05g2253 821 Gene3D - 45 157 IPR036426 -
Acco05g2253 821 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Acco05g2253 821 FunFam S-receptor-like kinase 5 572 776 - -
Acco05g2253 821 FunFam serine/threonine-protein kinase PBS1-like 466 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2253 Acco-ChrAcco05 38544205 38546670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2253 444 779 Receptor kinase-like Gene Family AT5G20050 44.972 3.25e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco05g2253 Pkinase 6.4e-51 CL0016