Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2240 ATGTTTGCAGAAGAGAATGGTTTGAAGGGAGACCCGAGGCTGCGAGCCATATCGGAAGCCATTAGAGTTGTGCCTCACTTCCCAAAACAAGGAATCATGTTTCAGGACATAACGACATTGTTGTTGAATCACAAAGTCTTCAAAGACACCGTTGATATTTTTGTCGATCGTTACAGAGACATGGATATTTCCGCTGTTGCCGGAGTGGAAGCTCGAGGATTTATGTTTGGCCCGGCGATTGCGCTACGCATCGGTGCAAAGTTTATTCCATTGCGCAAACCAAGAAAGCTGCCAGGTGAAGTGATATCAGAAAAATATGTTCTTGAATATGGAACTGATTGTCTGGAGATGCATGTTGGGGCTGTTCAGCCAGGGGAACGGGCCTTGGTTATTGATGATTTGGTCGCTACTGGTGGTACTCTTTCAGCTGCAATAAGACTACTTGAACGTCTTGGTGCTGAAGTAGTTGAATGTGCTTGTGTGGTTGGTGTTCCCGAGGTTAAGGGACATCGTAGGCTTAATGGAAAGCCACTGTATGTTCTTGTGGAGCCACGTGAAATCGAGAATGGATTTTCAGATGGATAG 585 0.4564 MFAEENGLKGDPRLRAISEAIRVVPHFPKQGIMFQDITTLLLNHKVFKDTVDIFVDRYRDMDISAVAGVEARGFMFGPAIALRIGAKFIPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPGERALVIDDLVATGGTLSAAIRLLERLGAEVVECACVVGVPEVKGHRRLNGKPLYVLVEPREIENGFSDG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2240 194 SUPERFAMILY PRTase-like 20 178 IPR029057 -
Acco05g2240 194 CDD PRTases_typeI 51 183 IPR000836 -
Acco05g2240 194 Gene3D - 6 184 IPR029057 -
Acco05g2240 194 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Acco05g2240 194 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Acco05g2240 194 Pfam Phosphoribosyl transferase domain 43 168 IPR000836 -
Acco05g2240 194 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Acco05g2240 194 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2240 Acco-ChrAcco05 38425004 38427632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2240 11 183 PRT Gene Family AT1G27450 69.364 1.89e-89 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2240 05 38425004 38427632 Acco10g1988 10 32520474 32522367 CCT
Acco05g2240 05 38425004 38427632 Acco05g2240 05 38425004 38427632 ECH
Acco10g1988 10 32520474 32522367 Acco05g2240 05 38425004 38427632 ECH