Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2227 ATGGAGTTTCCCGGGAAATCTGAGGACGATGAGACCAACCAATCTTGTTCCACAAATGTCAATAACAATAGGGAACAGGAATCACTTTCAAACTGCCAAGACACGAATTCTGTGAGGGAGATTGTCGCAGAGGATCCTAAAACAGCCGTTGAAGAAAATTCACCGCCCAATAAAAGGCTTAAGTTTCCTGCTACAGAATCTCACTTAAATTGGCAGCATATTCCTTCCAACCACCATATTCCAGAGCCTGTTATGCCAAACCCCTCTGTGGACCATGTCTATGAGCAATGCTCAAATCCTGTAAAAAGTGACGATCGTAGCCCATGTAGTGTAATAGATTCCTCACTCTTCCCTACTGTTGATGCAAAATCAGGAATGCCGGTGATGGTTTCTGAGGATCCTAATCAATTAGATGAGGTGGCATCACCAGCCTCAAAAAGTTGCCTGCCCCAGGAAGTTGTTCTGACAATGAATATTGATTCAGCTCCCACTAGCATGGATTTTCATCCTTGTTTGCGCCTCATTCTTCTAGTTGGAACTAAAATTGGCAGAATAAAAATTTGCGCCGTAGCTTCTGCCTCTTGTAAGGAGTTGCTTTCTAGAAAATTTGAGGTTTGGGGAGCACATTCAAGCAAATTCATGGAAGCCATAGATAAAGATATGCGGATCTCTGTTAACAAAGTCATTTGGAACACTGAACGTGAAGGTTTAATGTTCGGGGTTGCATTTTCTAAACATCTTGTCCAATTATATTCCACCGCTCGTTTATATTCCCGTAAGGGTGAACCTCGATTAGGCATTTACCCACACTTGGAAATTGAAGCTCATGATGGCAGTGTCAATGATATAGCCTTTTATTTGCATGGTCGACAACAATTAGTCATAACATGTGGTGACGACAAGGCAGTAAAGGTTGTAATTTCAAATTCAATTGATGGAGAGATTAAGGAACAATTATACAATCATATGGCCGAAGGTGCAGATTATGACCCCATTGGTTGTGGATACACTAAATTTTCTTACAGTACTGATAACAAAAGGCTTTTTTCATGTGGTGTTAACAACGAGGGAGAGCCATTTCTTGGGGAATGGGATGATAGTACAGGGAACAAAATAAGAGTTTACAAGGGACTTAAGGCTCCAAGCTCTTCTAAAATCCAATTTGATACCACATTAAACCGATATTTGGCTGCCGGTGATGAACATATGATTAAGTATTGGGATATGGACCATGTACAACTATTGGAAAACACCAAAGCTGATGGGGAATTGCTGGCAAATCCTTGCCTTTGCTTCAACAAAGATGGAAGATTGCTGGCTGTTGCTGCAAAAGAAAATAAAATCAAAATCTTAGCACCTGATTATGATGATTTTTGGAATATCTTCAAAATTTCCGAACCATCTCAATGCCAGTTCTGGCAGCTCCCTGGTCATCAAAGTGTCAACAAGATTGTTAGACTGATTTACACCAAGGAAGGAAAAGGCATCTTGGCATTGACATCAGATGGTAAAAATATACTTTGGAAATGGCCAGGGAACGAGCAAGCAACGTCCCATGATGGCCCTCGCTTATGGAAACCAAGGGATGGCTTGCAGTTTATGACCAATGACCTAGAAAACGTCGAGCCCGAACTAGAAAACGTCGAGCCCGAACTAGAAAACGTCGAGCCCGAACAATCAATAGGCTATTTTGCCATATCAAATAATGGTTTTAATCTCGTTTCAGCATCAGGTGGTTCAATCTCCTTGTTCAATATGGAGACATTCGAGGTTGTAAATAAGCTCCGCGGTAGGTACGCAATGGTTACTTCCCTTGCATTCTCAAATACTTTGCATGTTCTTGTTCATGCTGAGGGTGATCATACGATTTACTCATGGAATGTTGAAGACTGGAAAAAGTTGCACGGAGCGAGCTTGGTGATGCCTGCTGAGAGTAAGCCAGAAGATCAATGTCATACTCACATTCAGTTTTACCCAGAACAGATAAACTTCCTCGTTGTACAATATAGTCATCTTGCAATTTATGAAGCAGAGGGCTTAACTCTTGTCGAACAGTGGGTTCAATTACCTCCTTTGCCTATCGCCCACGCAGATTTTTCATCAGATGGAACGGAAATATATGCTGGTTTTGTGGATGGGACTATCAAAATATTGGATGGTTCAAATCTTCAACCTCTTTGCAGGATAGATCCCACTGCTTACATTCCCCTTCCCCCCACTTCAAGTGTATTTGGTGGTGGCAGTGAGAGCAAGCGCCTACTTGCTGTGGCTGCAAATCCAGTGAAGGCAGGCCAGTTTGCGGTGGGGCTTTCAGATGGTAAAGTCTATGTGATGGAGCCTCCAGAGGGACTTAAGTGGTCCACACTTGTACGTGATGATGACAAGGAGGCAGCAGGAACCGGTGGCGTGGGAGATGAGAATTGA 2424 0.4257 MEFPGKSEDDETNQSCSTNVNNNREQESLSNCQDTNSVREIVAEDPKTAVEENSPPNKRLKFPATESHLNWQHIPSNHHIPEPVMPNPSVDHVYEQCSNPVKSDDRSPCSVIDSSLFPTVDAKSGMPVMVSEDPNQLDEVASPASKSCLPQEVVLTMNIDSAPTSMDFHPCLRLILLVGTKIGRIKICAVASASCKELLSRKFEVWGAHSSKFMEAIDKDMRISVNKVIWNTEREGLMFGVAFSKHLVQLYSTARLYSRKGEPRLGIYPHLEIEAHDGSVNDIAFYLHGRQQLVITCGDDKAVKVVISNSIDGEIKEQLYNHMAEGADYDPIGCGYTKFSYSTDNKRLFSCGVNNEGEPFLGEWDDSTGNKIRVYKGLKAPSSSKIQFDTTLNRYLAAGDEHMIKYWDMDHVQLLENTKADGELLANPCLCFNKDGRLLAVAAKENKIKILAPDYDDFWNIFKISEPSQCQFWQLPGHQSVNKIVRLIYTKEGKGILALTSDGKNILWKWPGNEQATSHDGPRLWKPRDGLQFMTNDLENVEPELENVEPELENVEPEQSIGYFAISNNGFNLVSASGGSISLFNMETFEVVNKLRGRYAMVTSLAFSNTLHVLVHAEGDHTIYSWNVEDWKKLHGASLVMPAESKPEDQCHTHIQFYPEQINFLVVQYSHLAIYEAEGLTLVEQWVQLPPLPIAHADFSSDGTEIYAGFVDGTIKILDGSNLQPLCRIDPTAYIPLPPTSSVFGGGSESKRLLAVAANPVKAGQFAVGLSDGKVYVMEPPEGLKWSTLVRDDDKEAAGTGGVGDEN 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2227 807 MobiDBLite consensus disorder prediction 10 38 - -
Acco05g2227 807 MobiDBLite consensus disorder prediction 1 58 - -
Acco05g2227 807 ProSiteProfiles Trp-Asp (WD) repeats profile. 595 636 IPR001680 GO:0005515
Acco05g2227 807 SUPERFAMILY WD40 repeat-like 429 781 IPR036322 GO:0005515
Acco05g2227 807 Gene3D - 375 526 IPR015943 GO:0005515
Acco05g2227 807 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 140 452 IPR027728 GO:0006355
Acco05g2227 807 SUPERFAMILY WD40 repeat-like 159 511 IPR036322 GO:0005515
Acco05g2227 807 Gene3D - 144 357 IPR015943 GO:0005515
Acco05g2227 807 SMART WD40_4 588 627 IPR001680 GO:0005515
Acco05g2227 807 SMART WD40_4 368 408 IPR001680 GO:0005515
Acco05g2227 807 SMART WD40_4 547 585 IPR001680 GO:0005515
Acco05g2227 807 SMART WD40_4 150 189 IPR001680 GO:0005515
Acco05g2227 807 SMART WD40_4 266 307 IPR001680 GO:0005515
Acco05g2227 807 SMART WD40_4 417 452 IPR001680 GO:0005515
Acco05g2227 807 SMART WD40_4 680 719 IPR001680 GO:0005515
Acco05g2227 807 Gene3D - 527 797 IPR015943 GO:0005515
Acco05g2227 807 MobiDBLite consensus disorder prediction 40 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2227 Acco-ChrAcco05 38300995 38306337 Tandem