Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2215 ATGAAGACCAATCTTCTTCCTTTTGTGCTTCTCCTTGTCCTTCTTCTTCACGACCCCATTTCTGTTTATGCTGCTTCAGGCCCTCCTGCTTCAATGGCTGCTTCTTCCCCAGGTATACAAGTGGAGAACGAAGAACACCATATGGATTTACACAGGAAGATGGTAATAGCGCTCGCTGTTGTTAGTACAGCACTTGTTGTTGTCATTTTTTGCTTCTTATGCTTCTGGACTTACAGTAGGAAGCATCTATCCAAATCCAATAGGAAAAGCGTTCCCAACCCAGATGCTGAGAAAGGGGTTGCGCTTGCTCCATTTTTGAGTAAATTCAGTTCTGTAAAAATGGTTGGGAAAAAAGGGTTTCTTCCAATCATTGATTATAAGCAAATAGAAAATGCAACCAACAATTTCCAGGAAAGTAACATCTTGGGGAAGGGTGGATTTGGATGCGTATACCAAGCTCGGTTGGATGATAATCTAGATGTTGCCGTCAAGAAACTGCACTGTGAAACTCAAAGTGCTGAGAGAGAATTCGAGAACGAGGTGAATTTGTTGAGTGAATTTCGGCATCCAAATATAATCTCTGTACTCGGTTGCAGCGAAAATGAGGACAAGAGGTTCATTGTCTATGAACTGATGAAAAAAGGATCCCTGGAAGCTCAATTACACGGACCCTCTCATGGTGCGGCATTGACTTGGCGTATGAGAATGAAAATTGCTCTTGACACAGCAAGAGGATTAGAATACCTCCATGAGCACCGTAAGCCTGCAGTGATCCATAGAGATCTGAAATCATCTAATATCCTTCTAGATGAGAACTTCAATGCTAAGCTGTCTGATTTTGGGCTGGCCATAGTAGATGGGTCCCAGAGCAAGAGCAACATAAAGCTGTCAGGCACATTAGGGTACGTTGCACCCGAGTATCTCTTAGATGGAAAACTGACAGATAAAAGTGATGTGTACGCATTTGGGGTAGTGCTTCTGGAGCTTCTGCTGGGAAGGAAGCCGGTGGAGAAACTGTCACCATGTCATTGTCAATCGATCGTCACATGGGCGATGCCACAGCTCACCGACAGAACAAAGCTTCCAAACATAGTAGATCCTGTGATCAAGGACGCCATGGACCTTAAGCATTTATACCAGGTTGCAGCAGTGGCAGTTTTGTGCGTGCAACCAGAACCAAGTTATAGGCCGTTGATAACAGATGTGTTGCACTCTCTGGTGCCTCTGGTTCCAGTGGAACTTGGAGGAACTCTCAGACTCACACACGTGGCCGACCACTCTGTTATGTCATGA 1293 0.4478 MKTNLLPFVLLLVLLLHDPISVYAASGPPASMAASSPGIQVENEEHHMDLHRKMVIALAVVSTALVVVIFCFLCFWTYSRKHLSKSNRKSVPNPDAEKGVALAPFLSKFSSVKMVGKKGFLPIIDYKQIENATNNFQESNILGKGGFGCVYQARLDDNLDVAVKKLHCETQSAEREFENEVNLLSEFRHPNIISVLGCSENEDKRFIVYELMKKGSLEAQLHGPSHGAALTWRMRMKIALDTARGLEYLHEHRKPAVIHRDLKSSNILLDENFNAKLSDFGLAIVDGSQSKSNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPCHCQSIVTWAMPQLTDRTKLPNIVDPVIKDAMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPVELGGTLRLTHVADHSVMS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2215 430 ProSiteProfiles Protein kinase domain profile. 136 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2215 430 SUPERFAMILY Protein kinase-like (PK-like) 116 406 IPR011009 -
Acco05g2215 430 SMART serkin_6 136 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2215 430 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Acco05g2215 430 Pfam Protein kinase domain 136 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2215 430 Gene3D Phosphorylase Kinase; domain 1 102 211 - -
Acco05g2215 430 FunFam probable receptor-like protein kinase At1g80640 212 411 - -
Acco05g2215 430 Gene3D Transferase(Phosphotransferase) domain 1 212 411 - -
Acco05g2215 430 PANTHER OS01G0750732 PROTEIN 38 408 - -
Acco05g2215 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Acco05g2215 430 FunFam Protein kinase superfamily protein 103 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2215 Acco-ChrAcco05 38210581 38213507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2215 41 410 Receptor kinase-like Gene Family AT3G58690 44.297 6.42e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Acco05g2215 Pkinase 3.8e-49 CL0016