Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2214 ATGAAAGGCGTCAAGAATTTGATAATTTTGGCGTGTGGAAGGGGAAGCACATGCTTTGTTACTACAAACTTCCAAGATTTGGAAGTGTTTGCTGGTATCTCCCTTTACCTCTCGGCGCCGAGGATCTCTGAAGACGAAGCGAAGATGCCGTCCCATAAGACCTTCAGAATCAAGAAGAAGCTGGCCAAGAAGATGAGGCAGAACAGGCCTATTCCCTACTGGATCCGTATGAGGACCGACAATACCATCCGGTACAACGCCAAGCGTCGACACTGGCGCCGCACCAAGCTTGGATTCTGA 300 0.4967 MKGVKNLIILACGRGSTCFVTTNFQDLEVFAGISLYLSAPRISEDEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2214 99 PANTHER RIBOSOMAL PROTEIN L39E 41 99 - -
Acco05g2214 99 Gene3D Ribosomal protein L39e 49 99 IPR023626 -
Acco05g2214 99 SUPERFAMILY Ribosomal protein L39e 51 98 IPR023626 -
Acco05g2214 99 Pfam Ribosomal L39 protein 57 97 IPR000077 GO:0003735|GO:0005840|GO:0006412
Acco05g2214 99 Hamap 50S ribosomal protein L39e [rpl39e]. 49 99 IPR000077 GO:0003735|GO:0005840|GO:0006412
Acco05g2214 99 FunFam 60S ribosomal protein-like L39 49 99 - -
Acco05g2214 99 ProSitePatterns Ribosomal protein L39e signature. 78 94 IPR020083 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2214 Acco-ChrAcco05 38205126 38207341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2214 49 99 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 9.83e-30 99.0