Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2207 ATGGAAGAAGAGAACCACCAAGAAGACAGGATCAAGACAGAAACTTTATTTGATCTTAATGCTTCTGATCTTGATGAGAACAACCCCGAACTCAATCTCATCACTTGCTTGGATCAGAGTTCATCCAAAACATCATCAGAAAGCTGTGCCGATGGTGGTGGTGGTTCTGTTTCAGAAGCACAGCCAAGATTTTTCTCATGTAATTACTGCCAGAGAAAGTTCTACAGCTCACAAGCTCTTGGGGGACATCAAAATGCACACAAGAGAGAGAGATCAATAGCGAAAAGAGGACAGAGACTTGGAGCACAAATACTGGCTTCAGCTTATGGGCATCCCTTTCTGCATAATTATGGATATGCGAGCATGGCTTCTCTCCCTCTCTATGGTGCTTCTTGCAATAATAGGCCTCTGGGGATTCAGGCTCATTCTTTGATTCACAAGCCGTTTAATAATAATGTTCATAATAGGGGTTGGTCACAGCAACCTGGGATAGGGAAGCTAGAGATGGTGAATTTTCATAAAACGACGTCGTCGGGATTGGCTTCGAGAGGCAGTGTTGGGAGGTTTGAAATCGTGAAGGCCAAGATGGGTTCTGCAGAAAAGGAAGAGATGAGTGGGTATTTGGTGGGGGGGACTCATTGTTTGAAGGCTAATCCCGAAGAAATGAAGCATCTTGATTTGTCTCTCAAACTTTAA 696 0.4382 MEEENHQEDRIKTETLFDLNASDLDENNPELNLITCLDQSSSKTSSESCADGGGGSVSEAQPRFFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQRLGAQILASAYGHPFLHNYGYASMASLPLYGASCNNRPLGIQAHSLIHKPFNNNVHNRGWSQQPGIGKLEMVNFHKTTSSGLASRGSVGRFEIVKAKMGSAEKEEMSGYLVGGTHCLKANPEEMKHLDLSLKL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2207 231 Gene3D Classic Zinc Finger 52 109 - -
Acco05g2207 231 SUPERFAMILY beta-beta-alpha zinc fingers 62 92 IPR036236 -
Acco05g2207 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Acco05g2207 231 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 2 231 IPR044246 GO:0009788
Acco05g2207 231 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2207 Acco-ChrAcco05 38151636 38152331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2207 2 231 C2H2 Transcription Factor Family AT5G10970 40.637 2.11e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco05g2207 None None None