Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2202 ATGACTGTAGAAACCAGAGCTGATGAACCCAGAGGACAATTTCCTGTAGGAATGCGTGTTCTTGCTGTTGACGATGACCCAACTTGTCTCTTGGTGTTGGAAACTCTCCTTCGGAGATGCCAATATCACGTAACGACGACCAATCAGGCAATAACAGCTTTGAAGATGCTAAGAGAAAACAAAAACAAGTTCGACCTGGTTATTAGTGATGTTCATATGCCTGACATGGACGGATTTAAGCTTCTTGAGCTTGTTGGTCTTGAGATGGACCTACCTGTCATAATGTTGTCTGCAAATGGCGACACCAAGCTGGTGATGAAGGGAATTTCTCATGGGGCTTGTGACTATCTTCTGAAACCTGTTCGAATTGAGGAGCTCAAGAACATTTGGCAGCATGTGATAAGGAGGAAGAAATTTTACCCAAAGGAGAGAAACAGTACTTGCAATCAAGACAAGCCTCAATCTGGTACTACCAACAATGGATTAGGTTCAGCAGGAGCTGGGAGTACTGATCAAAATGCAAAGCTCAACAAGAAAAGGAAGGATCAGGATGATGAAGATGATGATGAGCAAGAGCATGGTCATGACAATGATGATCCTTCAACACAGAAGAAGCCTCGTGTCGTTTGGTCTGTTGAGCTCCACAGAAAGTTTGTTGCTGCTGTTAATCAATTAGGCATTGACAAGGCTGTGCCTAAAAAGATTCTGGATTTGATGAATGTTGAGAAGCTCACAAGGGAGAACGTGGCAAGCCATCTCCAGGCAATTTTCAAACACTTTCTGAAATACAGGTTGTATCTCAAGAGAATCAGCTGTGTAGCAAACCAGCAGGCTAATATGGTGGCAGCCTTAGGTAGCGCAGATGCATCCTATTTGAGAGTGGGATCTCTGGGTGGGATGAAACATCTTCAGCCATTGGGTGCTTCTGGACAGTTCCAGAACAATGTTTATCGATCCCTCCCATATAGTGGGATGATTGGAAGACTGAACACTCCTGCTGGTCTCGGTGTCCATGGGTTGCCTTCTTCAGGAATGCTTCAGTTGGGTCATTCGCAGAATTTAAACAACAACAGCATCAGCAACTCCATGAACGATCCTCTCAAGTTCCAGTCGTCCATAGGTCACGTCAATCAGAATCAGAATGGTGGTTCACTTCAGGGCATCCCAGTGTCTGTAGGGCTTGACCATTTACAACCCAACAAGGCTCTCAGTTCTGTTCAAGGTCCCACCACTGGTTTTGATGATAAAACAATGTCTCTCATCTCAAATAAGTTGTCTGACCCGAGCGCAGGAGTAGGCTCTAGTTGCTCTAGACCTCCACTCATGGGTATAGCGTCCAATGGCTTGTTGTTAGAACCGAATTCTCAAGACTCGCTAGGTGGGAGAGGTTATGAGAATCTTACTTCGGTAGCCTCTCAACACTCAGAATTTTCTTTGCCTTTGATGGATAATCATAATGGAAGGTGTAATGATAATTGGCCAAATGCTGTGCAGTCATCTGGGATGCCCACTAATTCTTACCCAACTAATGATTGTCTTCATGGAGGGAATCCAAGTGGTGCTTCTTCCATCACCTCACTTTCCACTCAGTCTCACGATTCGCTTGCAAATATGCAGTCCCATGGACCCATTTTTACTAACACCACCACCACTCCAAACTTGGCTTATCAAGGGTGGGATGATCATTCATTAGACTCTCTGATTCCTGTAAATGGAGGTCTTGGTGCATCAGGATTACACAGAAACTTGGACTATAGTTTTGGCAATCCCTTAGAAATGAAGCACGAGGGGTTCACTAAATCAGCCCAAGACCCGTCACTGAAACCAAATCAAGGATATATCATGGACCCCCTTAAGGCACAACGGAGTCGCATCTCTAACAATAATCTTGGTTCATTGGAGGACTTGGTCAGTGCAATGATGAAACAGGAGCAAGATTTCATATGTGATGATTTCACTGGTGGAACATCTATGTGA 1977 0.4451 MTVETRADEPRGQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAITALKMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRIEELKNIWQHVIRRKKFYPKERNSTCNQDKPQSGTTNNGLGSAGAGSTDQNAKLNKKRKDQDDEDDDEQEHGHDNDDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQAIFKHFLKYRLYLKRISCVANQQANMVAALGSADASYLRVGSLGGMKHLQPLGASGQFQNNVYRSLPYSGMIGRLNTPAGLGVHGLPSSGMLQLGHSQNLNNNSISNSMNDPLKFQSSIGHVNQNQNGGSLQGIPVSVGLDHLQPNKALSSVQGPTTGFDDKTMSLISNKLSDPSAGVGSSCSRPPLMGIASNGLLLEPNSQDSLGGRGYENLTSVASQHSEFSLPLMDNHNGRCNDNWPNAVQSSGMPTNSYPTNDCLHGGNPSGASSITSLSTQSHDSLANMQSHGPIFTNTTTTPNLAYQGWDDHSLDSLIPVNGGLGASGLHRNLDYSFGNPLEMKHEGFTKSAQDPSLKPNQGYIMDPLKAQRSRISNNNLGSLEDLVSAMMKQEQDFICDDFTGGTSM 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2202 658 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Acco05g2202 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 373 IPR045279 GO:0009736
Acco05g2202 658 CDD REC_typeB_ARR-like 20 134 - -
Acco05g2202 658 Gene3D - 17 154 - -
Acco05g2202 658 SUPERFAMILY Homeodomain-like 202 259 IPR009057 -
Acco05g2202 658 NCBIfam myb-like DNA-binding domain, SHAQKYF class 205 259 IPR006447 GO:0003677
Acco05g2202 658 SMART REC_2 18 130 IPR001789 GO:0000160
Acco05g2202 658 MobiDBLite consensus disorder prediction 143 205 - -
Acco05g2202 658 MobiDBLite consensus disorder prediction 146 173 - -
Acco05g2202 658 FunFam Two-component response regulator 201 271 - -
Acco05g2202 658 FunFam Two-component response regulator 18 174 - -
Acco05g2202 658 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 261 IPR017930 -
Acco05g2202 658 Gene3D - 201 271 - -
Acco05g2202 658 PIRSF RR_ARR_type-B 1 657 IPR017053 GO:0003677|GO:0003700|GO:0009736
Acco05g2202 658 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Acco05g2202 658 SUPERFAMILY CheY-like 17 143 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2202 Acco-ChrAcco05 38085141 38088166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2202 1 655 Response Regulator Gene Family AT2G25180 43.529 2.65e-134 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco05g2202 Response_reg 5e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2202 05 38085141 38088166 Acco10g1952 10 32322442 32326197 CCT