Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2198 ATGGCAAAGTATCACCGGAACAACGTCGGATCTCTGGTTCTCGACAATCACGATGCTGCCAGGAATGCAACAGTCGGCGCCCACTGCCGCATATGGAATGCCTTCTCCGCTTCAACAATACGCCGCATCATTTTTGACGCTGTCAGCTGCGGTGGTGGCTCTCGGCATCACCGCCACCACCGTGATGACTTTGCCTCCGCACCTTCGCCGATTTCATCAGACTCCGGGAACTCTAAGGACAAGTCGCAAGAACAGAGACAGAGTGCTTCCAAGTCCCAGCCGAAACCGAATGTGAAGTCGGAGAAACTATCGGATCTTCTGAACATTGCGGAGTCTGAAATCGACGCCGAAACGAAGAAGAAAGAAGAGGCATTGCAGGAATTGAAGAGAATTGTGAAGGAGTTACAGGTTGAGGATTTGAGAAAGCGGCAAATGGCTGCGGCGAGCGTGAGATTGCTCACGAAGGAAGACTCGGAAGTCAGAGGGACACTTGCAATGCTTGGAGTGATTCCTCCCTTGGTTGGAATGCTTGATTTGGAAGACGTCAGTTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAGGCGGCCATTGTCCAAGTTGGTGCTGTTCACAAAATGCTAAAGCTCATTGAATCACCGACTGGTCCAGATTCATCCGTCTCTGAAGCAGTCGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATGATAATAAACCGATAATTGGATCGTCGGGTGCGATTCCTTTCCTGTTCAGAACCCTGGAAAATCTACATAAAAAATCCAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCCCTGTACAACCTATCTATCTTCCCAGTCAACATCTCATTCATATTGGAAACGGATTTGGTTCCGTTTCTGATAAACTCAATAGGAGACATGGAAGTAAGTGAAAGAATTCTCTCGATCATAAGCAATTTGGTAACAATCCCTGAGGGTCGAAAAGCTATAAGTGCTGTGCGCGATGCATTCCCCATTCTGGTTGATGTATTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATTTTGATGATTATGGCACACAAAGCCTATGGTGACAGGCAGGGCATGATTGAGGCTGGGATTGTCTCGTCATTGCTTGAGTTGATGCTTCTGGGTACTGCGTTGGCACAGAAAAGGGCCTCGAGAATATTGGAATGCTTGAGAGTAGACAAAGGAAAGCAGATTTCTGGGGGTTCTGGTGGAAACTTCAGCTCAACTCTATCTGCTCCCATTTGTGGCTCTTCCTCATCTTGTCGGAAGCCAGATGGAAGTGGGAAGGAGTGTTTGGAAGAGGAGGAAGATATGATGAGTGACGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAATAACATGAGGAAAATTGTGAAAAGGGCCAATTTGCCTCAAGATTTCGTTCCATCCGATCAGTTTAAGGCACTCACTTCAGGATCGACTTCAAAAAGCCTGCCATTTTGA 1533 0.4723 MAKYHRNNVGSLVLDNHDAARNATVGAHCRIWNAFSASTIRRIIFDAVSCGGGSRHHRHHRDDFASAPSPISSDSGNSKDKSQEQRQSASKSQPKPNVKSEKLSDLLNIAESEIDAETKKKEEALQELKRIVKELQVEDLRKRQMAAASVRLLTKEDSEVRGTLAMLGVIPPLVGMLDLEDVSSQISSLYALLNLGIGNDANKAAIVQVGAVHKMLKLIESPTGPDSSVSEAVVANFLGLSALDDNKPIIGSSGAIPFLFRTLENLHKKSSPQAKQDALRALYNLSIFPVNISFILETDLVPFLINSIGDMEVSERILSIISNLVTIPEGRKAISAVRDAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQGMIEAGIVSSLLELMLLGTALAQKRASRILECLRVDKGKQISGGSGGNFSSTLSAPICGSSSSCRKPDGSGKECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSDQFKALTSGSTSKSLPF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2198 510 Gene3D - 96 266 IPR011989 -
Acco05g2198 510 Coils Coil 448 471 - -
Acco05g2198 510 Gene3D - 267 419 IPR011989 -
Acco05g2198 510 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 510 - -
Acco05g2198 510 MobiDBLite consensus disorder prediction 51 102 - -
Acco05g2198 510 Coils Coil 100 138 - -
Acco05g2198 510 SMART arm_5 243 287 IPR000225 GO:0005515
Acco05g2198 510 SMART arm_5 288 326 IPR000225 GO:0005515
Acco05g2198 510 SMART arm_5 199 242 IPR000225 GO:0005515
Acco05g2198 510 SMART arm_5 330 369 IPR000225 GO:0005515
Acco05g2198 510 SMART arm_5 157 197 IPR000225 GO:0005515
Acco05g2198 510 SUPERFAMILY ARM repeat 127 409 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2198 Acco-ChrAcco05 38042968 38044977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2198 146 407 U-box Gene Family AT3G46510 35.075 1.21e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2198 05 38042968 38044977 Acco10g1947 10 32256660 32258477 CCT