Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2192 ATGGAACCAAAATGCGAGAATAACACTACTTTACTCAACCTCAACGCCAGCCCTTCTCGGCACGTAGACGGTGTCCCGGCTGAGGTTATGTTGATGGAAGAGTTGCATCGTTTAAGAAGTGAGAAAAAGATGCTAACAGAGAAACTTACTCGCCTGACTGAGAGTTTTAATTCTCTGCAGAAGTATTTGAACCAAGTCCTTAAGAACACCAATTCTCAGCTGTACTTAAGTACAGTAGTACAGTCAAGGAAGAGAAAGGCTCATGAAACCGAGAATTGTAGTATCAATAATAATAATACGTTTAATTTTAGTGGCTCTTCTGAGTGCTGTACCAGTACTGAGGATTCATTCAAGAGGCCCGAGGATCACAGTTTCCCTATTTCTCCCAAGGTTTCAAAGGTTTTTGTGCGCACGCAGGCATCTGATCCCAGCTTATTAGTGAGTGATGGATATCATTGGAGGAAATATGGTCAGAAGGTCACAAGAGATAACCCTTCTCCCAGGGCTTACTTTAGGTGCTCCCTTGCCCCTAGCTGCCCCGTGAAGAAGAAGGTGCAAAGAAGTGCTGAAGACCCAACGTTATTGGTGGCGACTTATGAAGGAGAGCACAATCATATTGCGCGAGGAACTAAAGCAACATTTGGTCTGAGTCAAAGTGAAGTAACTGATCCAATTCATCCGGCGAAATCAAGTGGAGGGTTGAATGTGATTAGTGATGACCAGTTATTGATTCAGAAAATGGCTTCTTCTTTGACAAGAGATCCCACTTTCACATCAGCTCTTGCTACTGCCATTTCAGGAAGAATTTTAGATCACACTGTTCCCGAGCTAGCCAATAAATTATATATTTCAGATCATTTGCAGTAA 867 0.4268 MEPKCENNTTLLNLNASPSRHVDGVPAEVMLMEELHRLRSEKKMLTEKLTRLTESFNSLQKYLNQVLKNTNSQLYLSTVVQSRKRKAHETENCSINNNNTFNFSGSSECCTSTEDSFKRPEDHSFPISPKVSKVFVRTQASDPSLLVSDGYHWRKYGQKVTRDNPSPRAYFRCSLAPSCPVKKKVQRSAEDPTLLVATYEGEHNHIARGTKATFGLSQSEVTDPIHPAKSSGGLNVISDDQLLIQKMASSLTRDPTFTSALATAISGRILDHTVPELANKLYISDHLQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2192 288 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 29 206 IPR044810 GO:0003700
Acco05g2192 288 Coils Coil 35 55 - -
Acco05g2192 288 Gene3D WRKY domain 131 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g2192 288 SMART WRKY_cls 147 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2192 288 Pfam WRKY DNA -binding domain 149 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2192 288 ProSiteProfiles WRKY domain profile. 142 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2192 288 FunFam WRKY transcription factor 40 132 209 - -
Acco05g2192 288 SUPERFAMILY WRKY DNA-binding domain 145 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2192 Acco-ChrAcco05 37958426 37960234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2192 10 269 WRKY Transcription Factor Family AT1G80840 39.249 5.89e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g2192 WRKY 2.3e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2192 05 37958426 37960234 Acco10g1944 10 32197557 32198890 CCT