Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2191 ATGGATGTAAAGGAAGAAACGCTTCAATCGGAGTTGAAACGTGTGAGAGATGAGAATGACGCTTTAAAAGTGATGCTTCAAGTTCTGAAGAGCAAATACCAAATGGTTCAGTCTCAGCTTGAAGAAATAAGAGGATGGGACTCCAATATTCAAATTGCATCATCAGTTTCTGATTACGATATTACCAACAATAAGAGACCCAGAATTGAGTTGCCCATATCTCATAAACCACTACAGATCTTAGCCAGAACCCATCCCAAGGATAACAGTATGATGGTAAGAGATGGATATCAGTGGAGAAAGTATGGCCAGAAGGTTACAAAAGATAATCCATCGCCTCGAGCTTACTTCAGATGTTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAGGTACAAAGATGCGTGCAAGATAGGTCAATCCTAGTGGCAACTTATGAAGGAGAACACAACCATGGGGTTGTTGATCCTAAAACTCCCAATGGCTCAGTTGTTGACGACAGAGAAGTGACCAAATTTAATGATGCTGAGCTTCCTACTTGGATTCTGACAGATAGAAGACACAGTACTGAGGATATGAGCAACGTCAGAATTGAACAATTTGTAGGTTCTCTCATCAAAGATCCCAACTTTACCGTATCCTTAGCCGAAGCAGTTGCACGCTCCATCAATACCCAACAACAACGTAGGCAACAGCAAGACCTTGACCTTAATTTGAGTCTTGCTGAAGTGTAA 732 0.4153 MDVKEETLQSELKRVRDENDALKVMLQVLKSKYQMVQSQLEEIRGWDSNIQIASSVSDYDITNNKRPRIELPISHKPLQILARTHPKDNSMMVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCVQDRSILVATYEGEHNHGVVDPKTPNGSVVDDREVTKFNDAELPTWILTDRRHSTEDMSNVRIEQFVGSLIKDPNFTVSLAEAVARSINTQQQRRQQQDLDLNLSLAEV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2191 243 ProSiteProfiles WRKY domain profile. 88 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2191 243 Gene3D WRKY domain 81 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g2191 243 SMART WRKY_cls 93 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2191 243 Coils Coil 5 32 - -
Acco05g2191 243 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 43 IPR044810 GO:0003700
Acco05g2191 243 Pfam WRKY DNA -binding domain 95 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2191 243 SUPERFAMILY WRKY DNA-binding domain 89 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2191 Acco-ChrAcco05 37943792 37945113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2191 8 225 WRKY Transcription Factor Family AT1G80840 37.407 6.85e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g2191 WRKY 9.7e-24 CL0274