Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2174 ATGATGTCTGCGGTACCTGAAAATGATGGGAGAACCAAGCAGACACGTACTACTACCTTCTTTAACTTCTGCAAAGCAGAAAAGGGAATTTTGCTCTGCACTGATGTTGTTGCCCGTGGACTTGATATACCTGATGTGGACTGCATTGTGCAGTATGATCCTCCTGATGAACCTAAGGGTTGGTCGAACAGCTCGTGGGAAAGGTGGCAAAGTAAATGCTTTGCTTTCCTGATTCCTGAAGAGTTGCAATTTCTTCGCTATCTAAAGGAAAAGTTGGTGGGTAACAATTATTATTTGAACAAGGCAGCTAAAGATGCTTACAGATCATATATTCTTGCATATAATTCACACTCTATGAAGGACATTTTTAATGTTCATCGCCTTGATTTACAGGTTGTGGCGGCTTCATTCTGTTTTTCAAATCCACCAAAGTCAATTTGTGAGGCATTAGCCGCATTCATGTTACACAGTTTTGGTAGGTCCTATAATTTTGCTGGATTAAATGTTACTTGGTCACTGAATCTCTACAGCTCGGAATAG 540 0.4056 MMSAVPENDGRTKQTRTTTFFNFCKAEKGILLCTDVVARGLDIPDVDCIVQYDPPDEPKGWSNSSWERWQSKCFAFLIPEELQFLRYLKEKLVGNNYYLNKAAKDAYRSYILAYNSHSMKDIFNVHRLDLQVVAASFCFSNPPKSICEALAAFMLHSFGRSYNFAGLNVTWSLNLYSSE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2174 179 Gene3D - 4 151 IPR027417 -
Acco05g2174 179 PANTHER RNA HELICASE 10 59 - -
Acco05g2174 179 Pfam Domain of unknown function (DUF4217) 90 144 IPR025313 -
Acco05g2174 179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 99 IPR027417 -
Acco05g2174 179 Pfam Helicase conserved C-terminal domain 11 59 IPR001650 -
Acco05g2174 179 SMART DUF4217_3 83 147 IPR025313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2174 Acco-ChrAcco05 37858457 37860947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2174 8 56 Eukaryotic Initiation Factors Gene Family AT5G11170 38.776 8.38e-07 46.2