Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2172 ATGGACTATACTATGAAATTGATAAAGCGAGAGATTTCTACAATGAAATTGGTCAGGCACCCAAATGTCATTCGCATGTATGAGGTGATGGTTAGCAAGACCAAGATATATATTGTACTAGAATTTGTGACTGGTGGGGAGTTGTTTGATAAAATTGCATGCAAGGGCATGTTAAAAGAAGATGAAGCAAGAAAATATTTCCAGCAGCTTATATGTGCCTTAGATTACTGTCACGGTAGAGGTGTTTGTCATAGGGACCTGAAGCCTGAAAATTTGTTGCTGGATGCTAATGGAGACGGGCTGCTTCATACAACATGTGGTACACCAAATTATGTTGCCCCAGAGATCTTTAAGGCTGATTTCACATGCCCTCCTTGGTTCTCATCAAGTGCAAAGAAATTAATCAAGAGAATTCTTGACCCCAATCCTGCTACACGAATAACATTTGCTGAGGTAATTGAGAATGATTGGTTTAAGAAGGGATATGTGCCTACTAGATTCGAGCAAGCTGATGTTAGTCTTGATGATGTAGATGCTATATTCAACGAATCAGCGGTGTGA 561 0.3975 MDYTMKLIKREISTMKLVRHPNVIRMYEVMVSKTKIYIVLEFVTGGELFDKIACKGMLKEDEARKYFQQLICALDYCHGRGVCHRDLKPENLLLDANGDGLLHTTCGTPNYVAPEIFKADFTCPPWFSSSAKKLIKRILDPNPATRITFAEVIENDWFKKGYVPTRFEQADVSLDDVDAIFNESAV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2172 186 Gene3D Transferase(Phosphotransferase) domain 1 121 184 - -
Acco05g2172 186 Gene3D Transferase(Phosphotransferase) domain 1 48 120 - -
Acco05g2172 186 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Acco05g2172 186 SMART serkin_6 3 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2172 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 82 94 IPR008271 GO:0004672|GO:0006468
Acco05g2172 186 SUPERFAMILY Protein kinase-like (PK-like) 4 168 IPR011009 -
Acco05g2172 186 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 116 166 - -
Acco05g2172 186 Pfam Protein kinase domain 7 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2172 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2172 Acco-ChrAcco05 37849033 37850974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2172 30 185 CBL-interacting serine-threonine protein kinases AT1G30270 62.500 8.93e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco05g2172 Pkinase 3.7e-31 CL0016