Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2151 ATGAAGAAGCTGATCGTCTTGTTCATGTGGGCTTTATGTTTTTCCCTGAGCAGCATGGCACAGGCAAAAGAAAGCGTGCCAGTAAAAGTAGGAATCGTACTTGATCTTTCTTCTCCGACCGCAAAGATGGGCTTGAGCTGTATCAACATGGCCCTTTCTGATTTTTATGCCTCTCATTCTTATTACAACACCAGGCTCGTTTTCATCGTCAGGGACTCTCACTCAGATGTTGTTTCTGCGGCTTCTCAAGCTCTAGATCTCATAAAGTCAGAGAAAGTGCAAGCCATAATAGATGGTTTGGCTAATGGATTAAGCTCTTTAAATTCCTCAGTCATAGAATCAATGGAAGGAGTGTTGGGTGTGAGGACCTATATTCCCAAAACAGAGCAGTTAGATGAGTTTAAAGTTCGATGGAAAAGAAGATTCCTACGAGACAATCCTACCCTTCTTGATACAGATTTGAATGTTTTTGGGGTATGGGCTTATGATGCTGTCACAGCATTAGCTATGGCTATTGAGAAAGTTGATACCAACAACCTTGGTTTTGCTCTGACCAATGCTACTTCGTCCAACTCAACTGATTTGGAAAGGACTGGAGTTTCAAAAAGTGGTGAAAAGCTTCGTGAAGCCTTGTCAAACACTACATTTACAGGCCTAAGTGGAGAATTCAGCATTGTTAACCGGCAATTGCAAGCTTCAACGTTTGAGATATTGAATGTGATTGGGAAAGGAGGAAGAGTAATAGGGTTTTGGACCCCACAAAATGGAATAGTCAGAAATCTAAACTCAACTAAGACCCAGATGTATTCTACATCAAGTAAGGATCTTGGTACAATTATATGGCCAGGGGACACGAACTCTGTTCCAAAGGCATGGGAAATCCCCACAAATGCGAGGAAGTTAAGGATAGGGGTGCCAGAGAAAAATGGTTATCCTCAATTCGTGAAAGTATCTTATGATCCCATCACTAATACAACAGATGTCACTGGATTTTGCATTGACGTGTTCAAAGCAGTGTTGGAAGTTCTCCCTTATGCCTTACCCTATGAATTTATCCCTTTTACTAAACCAAATGGCGATAGTGCAGGATCATACAATGAGCTGATTAGCCAAGTTTATTTTGGGAACTTTGATGCCGTGGTGGGGGATGTAACAATTATAGCAAACAGGTCTAACTATGTGGATTTCAGTTTGCCGTACACTGAATCTGGTGTAACAATGGTAGTTCCAGTAAAAGACAACAGGAACAAGAATGCTTGGGCCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTAACAATAGCTTGTTCCTTTGTATTCATTGGGTTTGTTGTGTGGGTGCTTGAACACAGAATAAACGAACATTTTAGAGGACCCCCATCTCACCAGATTGGAACAAGCTTATGGTTTTCATTCTCGACCATGGTTTTTGCACATCGAGAAAAAGTGGTGAGCAACCTGGGTAGATTTGTGGTAATTATATGGGTTTTTGTGGTTCTAATTTTGGTTCAAAGCTACACTGCTAGTTTGACCGCACTTTTGACGATTGAGCAGCTCAACCCAACTGTAACTGACGTTAATTTACTGATAAAGAACAGAATGAATGTTGGTTACAAGCAAGGTTCGTTTGTGATTGAAATCTTGAAGGAAATGGGTTTCCTTGATTACCAACTTAAAACGTATAAATCCCCGGAGGAATGCAACAAACTATTTGAAAGAGGAAATGCAAATGGTGGCATTGCAGCTGCATTTGATGAAGTGCCTTACGTTGTCAAATTCTTCCTTCAAAGTTACTGTTCTAAGTATGCCATGCTTGAACCAACTTTTAAAACTGGCGGCTTTGGATTTGTGTTCCCTAAAGGTTCTCCTCTTGTGGCTGACATTTCAAGGGCAGTCCTGAATGTTACACAAGGAGATAAAATGAAGGTGATCGAGAATGCTTGGTTCAGAAAAAACAACTGCCCAGGTTCTGATACCTCAATTTCATCAAACAGTCTTGGACTTGAAAGCTTCTGGGGACTACTTCTCATTGTAGGGGTTACTTCTACTCTGGCTCTAAGTATTTTCACCGTGAACTTCCTATATCAGAACAAGCAAATCTGGTTACATAATGATCCCAATACCTCAAAGTGGAAACGAATTGGGAAGTTGATAGAGAAGTTTGACCAGAGGGACATGAGTTCTCACACCTTCAGAAAAAGGGAAATGCAGAATAATAGTGAAGATTATAGCATACATGATATGTGTGAAGTTGAGGCATCTCCACATACAAATTGCCCTCCAAGTCCATCTGAATCAGAACCAAGTTTCTCGTTTTATAGCGAGGCTAGCCCTAATAGGCCAGCACCACAAGACACAGAAATAAAAACGCCTGAGGGCATTCTGTGA 2388 0.4104 MKKLIVLFMWALCFSLSSMAQAKESVPVKVGIVLDLSSPTAKMGLSCINMALSDFYASHSYYNTRLVFIVRDSHSDVVSAASQALDLIKSEKVQAIIDGLANGLSSLNSSVIESMEGVLGVRTYIPKTEQLDEFKVRWKRRFLRDNPTLLDTDLNVFGVWAYDAVTALAMAIEKVDTNNLGFALTNATSSNSTDLERTGVSKSGEKLREALSNTTFTGLSGEFSIVNRQLQASTFEILNVIGKGGRVIGFWTPQNGIVRNLNSTKTQMYSTSSKDLGTIIWPGDTNSVPKAWEIPTNARKLRIGVPEKNGYPQFVKVSYDPITNTTDVTGFCIDVFKAVLEVLPYALPYEFIPFTKPNGDSAGSYNELISQVYFGNFDAVVGDVTIIANRSNYVDFSLPYTESGVTMVVPVKDNRNKNAWAFLKPLTWDLWVTIACSFVFIGFVVWVLEHRINEHFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNLGRFVVIIWVFVVLILVQSYTASLTALLTIEQLNPTVTDVNLLIKNRMNVGYKQGSFVIEILKEMGFLDYQLKTYKSPEECNKLFERGNANGGIAAAFDEVPYVVKFFLQSYCSKYAMLEPTFKTGGFGFVFPKGSPLVADISRAVLNVTQGDKMKVIENAWFRKNNCPGSDTSISSNSLGLESFWGLLLIVGVTSTLALSIFTVNFLYQNKQIWLHNDPNTSKWKRIGKLIEKFDQRDMSSHTFRKREMQNNSEDYSIHDMCEVEASPHTNCPPSPSESEPSFSFYSEASPNRPAPQDTEIKTPEGIL 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2151 795 SUPERFAMILY Periplasmic binding protein-like II 278 652 - -
Acco05g2151 795 Pfam Receptor family ligand binding region 98 241 IPR001828 -
Acco05g2151 795 Pfam Bacterial extracellular solute-binding proteins, family 3 325 650 IPR001638 -
Acco05g2151 795 MobiDBLite consensus disorder prediction 752 795 - -
Acco05g2151 795 FunFam Glutamate receptor 2.7 556 656 - -
Acco05g2151 795 Gene3D - 420 546 - -
Acco05g2151 795 SUPERFAMILY Periplasmic binding protein-like I 27 107 IPR028082 -
Acco05g2151 795 Gene3D - 120 231 - -
Acco05g2151 795 Gene3D - 24 119 - -
Acco05g2151 795 FunFam Glutamate receptor 419 549 - -
Acco05g2151 795 FunFam Glutamate receptor 300 419 - -
Acco05g2151 795 SUPERFAMILY Periplasmic binding protein-like I 107 293 IPR028082 -
Acco05g2151 795 SMART GluR_14 300 651 IPR001320 GO:0015276|GO:0016020
Acco05g2151 795 PIRSF IGluLR_plant 97 780 IPR017103 -
Acco05g2151 795 PIRSF IGluLR_plant 1 99 IPR017103 -
Acco05g2151 795 FunFam Glutamate receptor 163 299 - -
Acco05g2151 795 Gene3D - 295 419 - -
Acco05g2151 795 SUPERFAMILY Voltage-gated potassium channels 430 515 - -
Acco05g2151 795 Pfam Ligand-gated ion channel 651 680 IPR001320 GO:0015276|GO:0016020
Acco05g2151 795 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 67 722 IPR015683 -
Acco05g2151 795 MobiDBLite consensus disorder prediction 757 784 - -
Acco05g2151 795 CDD GluR_Plant 299 649 - -
Acco05g2151 795 Gene3D - 547 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2151 Acco-ChrAcco05 37707760 37711352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2151 6 97 Ion Channels AT2G29120 48.913 1.35e-17 85.9