Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2149 ATGAAGAAGAAGAAGAGCGTCAAAGTTGCAGACGCCCTGGTCTTCTATTGTGCTGTGATGACTCTCTGTTTGAGGCTGAGCGTCTCACAAAGCAACACAACTACGGTGCCGGTGAAGGTGGGAGTTGTACTTGATCTTTTCCTCACAACTGCTAAAATCGGACTCAGCTGCATCAACATGTCCCTCTCTGACTTTTATGCCTCTCATTCTCATTACAACACCAGGCTCCTCCTCCACGTCACTGACTCCCACTCACACATCATCACTGCTGCCTCTCAAGCTATAGATCTCATAAAAGAAGAACAAGTGCAAGCAATTATCGGACCCTTTACGTCAATGGAAGCTAACTTCGTTATCAGCCTCGGAGACAAAGCTCATGTGCCCATCGTAACATTTTCGGCAACAAGTCCTTCTCTTGCTTCCCTTCGGAGTCCATATTTCTTTCGAGTTGCACAAAACGACTCAGCTCAAGTGAACGCCATTGGAGCAATCGTCCAAGCTTTCGGGTGGAAAAACGCGGTGCCCATTTACGTAGGCAACGATTACGGGAAAGGGGTCATACCCTTTTTGACTAATGCCCTTCAACAAGTGTACGTTCGAATCCCATATCAGAGTACTATTTCAGCTTCAGCCACCGATGAAGATATCAAAGCAGAGCTCTACAAGCTAATGACCATGCAAACCAGAGTATACGTTGTGCACATGACGCCTAATCCAGGCGAGCGACTCTTTAGAATAGCATGTGAGATTGGTATGATGAACGAAGGCTATGTTTGGATCGTCACCGATGGTTTGGGCAATGAGGTGAATTCATTAGGATCCTCAGTGATAGATTCGATGCAAGGAGTACTGGGTGTGAGGACCTATGTTCCAAAAACAGAACGGCATGACGATTTTAAAGTTCGATGGAGAAGAAAAGTCGTAAAAGACAATCCTACCCTTGTTGGTACAGATTTGAATGTTTTTGGAAAGTGGGCTTATGATGCTGCCACAGCATTAGCTATGGCTGTTGAGAAGGCTGGCGCCAAGAATCTCGGATTTGATATTAGCAATAATGCTTTTGGTAATTTTTCTGATCTTGAAAAGTTGGGAGTTTCAGAGAATGGGGAAAATCTGAGTAAGGCGTTATCAGAGACTAGATTTAGTGGCATCAGTGGAGAGTTCAGTGTTATTGAGGGACAATTGCAAGCATCCACATTTGAGATAATCAACGTTAATGGTAATGGAGAGAGACTGGTAGGATTTTGGACACCAGAAAAAGGAATAACAAGGGATCTGAATTTCACAAGCACAAGCACTACATATTCTAGTTCTAGGAATAATTTGAAGCCTATCATATGGCCAGGAGATGCATCCTCTGTTCCAAAGGGTTGGGATAATCCTACAGATAAGAAAAAGACCATGAGGATAGGAGTTCCTGTGAAAAAGGGTTTTACTGAATTTGTGAAGGTAACACATGACCGGAGCACCAATACAACAGATGTCACTGGATTCTGCATAGACGTAGTTAAGGCAGTGCTGGATGTTTTGCCTTACGCCGTCCCTTACGAATTTATCCCATTTGAGAAATCCGATGGAGAACCAGCAGGAACATACGATGAGCTGATCAACCAAGTTTCTTATGGGAATCTGGATGCTGTTGTTGGAGATACGACGATCACAGCAGACAGGTCGAATGAGGTAGACTTCACTATGCCATACACGGAATCTGGTGGGACTATGATTGTTCTGTTAGTGGAAAATAAGCACAAGAGTCCATGGGATTTCTTGAAGCCATTGACATGGGATCTGTGGGTGACCACAGCTTTTTCGTTCATATTTGTTGCCTTCGTCGTGTGGGTGCTTGAACATCGAATAAACGATGCGTTCCGAGGACCTCCTTCACATCAGATCGGTACCAGCTTATCATTTTCATTCTCAGTCTTAGTGTTCGCCCATCGGGAGAGAATAGTGAGCAACTGTGCTAGATTTGTGGTGATAATGTGGGTCTTCGTGGTACTAATTCTGATCCAAAGCTACTCGGCAAGCTTGACTTCACTCTTGACCGTTCATCAGCTGCATCCAAGCGTTACAGATGTGAATCAGTTGATAAAAAATAAGCTGAATGTTGGGTACCACAGAGGTTCTTTTGTCTATGGGATATTAAAGGAAATGGGATTTCAAAATTCCCAACTCATTCCTTTTGATTCCCCTGAACACTGTGATGAACTGTTTACACAAGGAAGTGCCAAGGGTGGCATTGACGCTGCTTTTGACGAAATGCCCAATGTGAAGCTTTTTCGTGCCACTGACTGCTCCAAATATGCTTCCACCACTCCACCTACCTTTAGAACTGATGGCTATGGTTATGTGTTCCCTAAACGGTCTCCTCTAGTGGCAGACATATCAAGGGGAATCCTGAATGTGACTCAGGGAGATAAAATGAAAACGATAGAGAACGCGTGGTTCAAGGGAAGTCGTTGTGCTGGGAACGATGCTTCAGTTTCTTCTGATAATCTAAGCATCGATAGTTTCTGGGGACTATTCTTCATAGCAGGGCTTGCTTCAGTTTCAGCTCTCTTCATATCTGTAGTCAGATTCCTACATCAGCATAAGCATATCTGGCTGTCCAATAATCCGTCTGACACCTCATCATCATCGATATGGAAACGAATCAGTGTGTTGCTTCAAGTGTTTGACGACAAAGACCTGAGCTCCCACACATACAGAACAAGTGAACGTAAAAGTGCAGCTCATGGATCATCATCATGTGCAACTGCGTTCTCTCTTAGTCCAAGTACTCGCTTCCCACCAAGTCCGTCGAGTCAGACGGAATCAAATTTCTCGTTTTCAGTAGAACATTGA 2844 0.4416 MKKKKSVKVADALVFYCAVMTLCLRLSVSQSNTTTVPVKVGVVLDLFLTTAKIGLSCINMSLSDFYASHSHYNTRLLLHVTDSHSHIITAASQAIDLIKEEQVQAIIGPFTSMEANFVISLGDKAHVPIVTFSATSPSLASLRSPYFFRVAQNDSAQVNAIGAIVQAFGWKNAVPIYVGNDYGKGVIPFLTNALQQVYVRIPYQSTISASATDEDIKAELYKLMTMQTRVYVVHMTPNPGERLFRIACEIGMMNEGYVWIVTDGLGNEVNSLGSSVIDSMQGVLGVRTYVPKTERHDDFKVRWRRKVVKDNPTLVGTDLNVFGKWAYDAATALAMAVEKAGAKNLGFDISNNAFGNFSDLEKLGVSENGENLSKALSETRFSGISGEFSVIEGQLQASTFEIINVNGNGERLVGFWTPEKGITRDLNFTSTSTTYSSSRNNLKPIIWPGDASSVPKGWDNPTDKKKTMRIGVPVKKGFTEFVKVTHDRSTNTTDVTGFCIDVVKAVLDVLPYAVPYEFIPFEKSDGEPAGTYDELINQVSYGNLDAVVGDTTITADRSNEVDFTMPYTESGGTMIVLLVENKHKSPWDFLKPLTWDLWVTTAFSFIFVAFVVWVLEHRINDAFRGPPSHQIGTSLSFSFSVLVFAHRERIVSNCARFVVIMWVFVVLILIQSYSASLTSLLTVHQLHPSVTDVNQLIKNKLNVGYHRGSFVYGILKEMGFQNSQLIPFDSPEHCDELFTQGSAKGGIDAAFDEMPNVKLFRATDCSKYASTTPPTFRTDGYGYVFPKRSPLVADISRGILNVTQGDKMKTIENAWFKGSRCAGNDASVSSDNLSIDSFWGLFFIAGLASVSALFISVVRFLHQHKHIWLSNNPSDTSSSSIWKRISVLLQVFDDKDLSSHTYRTSERKSAAHGSSSCATAFSLSPSTRFPPSPSSQTESNFSFSVEH 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2149 947 PIRSF IGluLR_plant 8 943 IPR017103 -
Acco05g2149 947 Gene3D - 585 714 - -
Acco05g2149 947 CDD PBP1_GABAb_receptor_plant 39 426 IPR044440 -
Acco05g2149 947 Pfam Ligand-gated ion channel 818 848 IPR001320 GO:0015276|GO:0016020
Acco05g2149 947 FunFam Glutamate receptor 467 586 - -
Acco05g2149 947 Gene3D - 364 466 - -
Acco05g2149 947 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 881 IPR015683 -
Acco05g2149 947 FunFam Glutamate receptor 586 716 - -
Acco05g2149 947 SUPERFAMILY Periplasmic binding protein-like I 37 449 IPR028082 -
Acco05g2149 947 Gene3D - 467 584 - -
Acco05g2149 947 Gene3D - 159 319 - -
Acco05g2149 947 SMART GluR_14 469 818 IPR001320 GO:0015276|GO:0016020
Acco05g2149 947 FunFam Glutamate receptor 365 465 - -
Acco05g2149 947 Gene3D - 66 158 - -
Acco05g2149 947 Gene3D - 739 823 - -
Acco05g2149 947 FunFam Glutamate receptor 157 316 - -
Acco05g2149 947 SUPERFAMILY Periplasmic binding protein-like II 445 819 - -
Acco05g2149 947 MobiDBLite consensus disorder prediction 911 947 - -
Acco05g2149 947 Pfam Receptor family ligand binding region 57 408 IPR001828 -
Acco05g2149 947 CDD GluR_Plant 466 816 - -
Acco05g2149 947 Pfam Bacterial extracellular solute-binding proteins, family 3 492 817 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2149 Acco-ChrAcco05 37687260 37691137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2149 13 938 Ion Channels AT2G29120 50.267 0.0 872