Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2148 ATGGAGAAGAAGAAGGGCGCCAAAGTTGCAGACGCCCTGGTCTTCTATTGTGCTATGATGACTCTCTGTTTGAGGCTGAGCGTCTCACAAAGCAACACAACTACGGTGCCGGTGAAGGTGGGAGTTGTACTTGATCTTTCCCTCACAACTGCTAAAATCGGACTCAGCTGCATCAACATGTCCCTCTCTGACTTTTATGCCTCTCATTCTCACTACAACACCAGGCTCCTCCTCCACGTCACTGACTCCCACTCACACGTCATCACTGCTGCCTCTCTAGCTATAGATCTCATAAAAGTAGAACAAGTGCAAGCCATTATCGGACCCTTTACGTCAATGGAAGCTAACTTCGTTATCAGCCTCGGAGACAAAGCTCACGTGCCCATCGTAACATTTTCGGCAACAAGTCCTTCTCTTGCTTCCCTTCGGAGTCCATATTTCTTTCGAGTTGCACAAAACGACTCAGCTCAAGTGAACGCCATTGGAGCAATCGTCCAAGCTTTCGGCTGGAAAAACGCGGTGCCCATTTACATAGGCAACTCTTACGGGAAAGGGATCATACCCTTTTTGACTAATGCCCTTCAACAAGTGTACGTTCGAATCCCATATCAGAGTACTATTTCAGCTTCGGCCACCGATGAAGATATCAAAGCAGAGCTCTACAAGCTAATGACCATGCAAACCAGAGTGTTCGTTGTGCACATGACGCCTAATCCAGGCGAGCGACTCTTTAGAATAGCATGTGAGATTGGTATGATGAACGAAGGCTATGTTTGGATCGTCACCGATGGTTTGGGCAGTGAGGTGAATTCATTAGGATCCTCAGTGATAGATTCGATGCAAGGAGTACTGGGCGTGAGGACCTATGTTCCGAAAACAAAACGGCATGACGATTTTAAAGTTCGATGGAGAAGAAAATTTGTAAAAGGCAATCCTACCCTGGTTGATACAGATTTGAATGTTTTTGGAAAATGGGCTTATGATTCTGCCACAGCATTAGCTATGGCTGTTGAGAAGGCCGGCTCCAAGAATCTCGGATTTGATATGAGCAATAATGCTTCTGGTAATTTTTCTGATCTTGAAAAATTGGGAGTTTCAGAGAATGGGAAAAATCTGAGTAAGGCGTTATCAGAGACTAGATTTAGTGGCATAAGTGGAGAGTTCAGTGTTATTGAGGGGCAATTGCAAGCATCCACATTTGAGATAATCAACGTTAATGGTAATGGAGAGAGACTGGTAGGATTTTGGACACCCGAAAAAGGAATAACAAGGGATCTGAAATTCACAAGCACAAGCACTACATATTCTAGTTCTAGGAATAATTTGAAGCCTATCATATGGCCAGGAGATATATCCTCTGTTCCAAAGGGTTGGGACAATCCTACATATAAGAAAAAGACCATGAGGATAGGAGTTCCTGTGAAAAAGGGTTTTACTGAATTTGTGAAGGTAACACATGACCGGAGCACCAATACAACAGATGTCACTGGATTCTGCATAGACCTATTTAAGGCAGTCCTGCAAGTTTTGCCTTACGCTGTCCCTTACGAATTTATCCCATTTGAGAAACCCGATGGAGAACCAGCAGGAACATACGATGAGCTGATCAACCAAGTTTCTTATGGGAATCTGGATGCTGTTGTTGGAGACACGACAATTACAGCATATAGGTCGAATGAGGTGGACTTCACTATGCCATACACAGAATCTGGTGGGACTATGATTGTTCTGTTAGTAGAAAATAAGCACAAGAGTCCATGGACTTTCTTGAAGCCATTGACGTGGGATCTGTGGGTGACCACAGCTTTTTCGTTCATACTTGTTGGCTTCGTCGTGTGGGTGCTTGAACATAGAATAAACGATACGTTCCGAGGACCTCCTTCACATCAGATTAGTACCAGCTTATGGTTTTCATTCTCAATTTTGGTGTCTGCCCATCGGGAGAAAATAGTGAGCAACTGTGCTAGATTTATGGTGATAATGTGGGTCTTCGTGGGACTAATTCTGATCCAAAGCTACACGGCAAGTTTGACTTCACTCTTGACCGTTCAACAGCTGCGTCCAAGTGCTACAGATGTGAATCAATTGATAAAAAATAAGCTGAATGTGGGGTACAACAGAGGTTCTTTTGTGTATGGGATGTTAAAGGAAATGGGATTTCAAGATTCCCAACTCATTCCTTATGATTCCCCAGAACACTGTGACGCATTGTTTACACAGGGAAGTACTAAGGGTGGCATTGACGCTGCTTTTGACGAAATGCCCAACGTGAAGTTCTTTCGTGCAACTTACTGCTCCCAATATGCTTCCACAACTCCACCTATCTTTAGAACTGATGGCTATGGCTATGTGTTCCCTAAAGGGTCTCCTCTAGTGGCAGACATATCAAGGGGAATCCTGAATGTGAGTCAGGGAGATAAAATGAAAACGATAGAGAACGCGTGGTTCAAGGGAAATCATTGTGCAGGGAACGATGCTTCAGTTTCTTCTAATAATCTAAGCATCGATAGTTTCTGGGGATTGTTCTTCATAGCAGGGCTTGCTTCAGTTTCAGCTCTCTTCATATCTGTAGTCAGATTCCTACATCAGCATAAGCATATCTGGATGCCCAATAATCCATCTGACACATCATCATCGATATCGAAACGAATCAGTGCGTTGCTTGAAGTGTTTGACGACAAAGACCTCAGTTCCCACACATACAGAAAAAGAAGTCCAGCTCATGAATCATCATCAGGTGCAACTGCGTTCTCTCCAAGTCCAAGTACTCACTTCCCACCAAGTCCGTCGAGTCAGATGGAATCAAATTTCTCGTTTTCAGTAGAACATGGAAACGTTAATCCATATGGAGAAGCACCTCAAGACATAGAGATGAGCATGGTGCATAGTTTCCCACCCTCACCCTCACCCTCACCTGTAACCAGTCCTTCAAACAACTGA 2940 0.4401 MEKKKGAKVADALVFYCAMMTLCLRLSVSQSNTTTVPVKVGVVLDLSLTTAKIGLSCINMSLSDFYASHSHYNTRLLLHVTDSHSHVITAASLAIDLIKVEQVQAIIGPFTSMEANFVISLGDKAHVPIVTFSATSPSLASLRSPYFFRVAQNDSAQVNAIGAIVQAFGWKNAVPIYIGNSYGKGIIPFLTNALQQVYVRIPYQSTISASATDEDIKAELYKLMTMQTRVFVVHMTPNPGERLFRIACEIGMMNEGYVWIVTDGLGSEVNSLGSSVIDSMQGVLGVRTYVPKTKRHDDFKVRWRRKFVKGNPTLVDTDLNVFGKWAYDSATALAMAVEKAGSKNLGFDMSNNASGNFSDLEKLGVSENGKNLSKALSETRFSGISGEFSVIEGQLQASTFEIINVNGNGERLVGFWTPEKGITRDLKFTSTSTTYSSSRNNLKPIIWPGDISSVPKGWDNPTYKKKTMRIGVPVKKGFTEFVKVTHDRSTNTTDVTGFCIDLFKAVLQVLPYAVPYEFIPFEKPDGEPAGTYDELINQVSYGNLDAVVGDTTITAYRSNEVDFTMPYTESGGTMIVLLVENKHKSPWTFLKPLTWDLWVTTAFSFILVGFVVWVLEHRINDTFRGPPSHQISTSLWFSFSILVSAHREKIVSNCARFMVIMWVFVGLILIQSYTASLTSLLTVQQLRPSATDVNQLIKNKLNVGYNRGSFVYGMLKEMGFQDSQLIPYDSPEHCDALFTQGSTKGGIDAAFDEMPNVKFFRATYCSQYASTTPPIFRTDGYGYVFPKGSPLVADISRGILNVSQGDKMKTIENAWFKGNHCAGNDASVSSNNLSIDSFWGLFFIAGLASVSALFISVVRFLHQHKHIWMPNNPSDTSSSISKRISALLEVFDDKDLSSHTYRKRSPAHESSSGATAFSPSPSTHFPPSPSSQMESNFSFSVEHGNVNPYGEAPQDIEMSMVHSFPPSPSPSPVTSPSNN 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2148 979 SUPERFAMILY Periplasmic binding protein-like I 37 449 IPR028082 -
Acco05g2148 979 CDD PBP1_GABAb_receptor_plant 39 426 IPR044440 -
Acco05g2148 979 Gene3D - 586 714 - -
Acco05g2148 979 Pfam Bacterial extracellular solute-binding proteins, family 3 492 817 IPR001638 -
Acco05g2148 979 PIRSF IGluLR_plant 8 947 IPR017103 -
Acco05g2148 979 Gene3D - 350 465 - -
Acco05g2148 979 FunFam Glutamate receptor 157 317 - -
Acco05g2148 979 Pfam Ligand-gated ion channel 818 848 IPR001320 GO:0015276|GO:0016020
Acco05g2148 979 MobiDBLite consensus disorder prediction 965 979 - -
Acco05g2148 979 Pfam Receptor family ligand binding region 57 408 IPR001828 -
Acco05g2148 979 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 885 IPR015683 -
Acco05g2148 979 FunFam Glutamate receptor 586 716 - -
Acco05g2148 979 Gene3D - 741 823 - -
Acco05g2148 979 Gene3D - 160 320 - -
Acco05g2148 979 Gene3D - 466 585 - -
Acco05g2148 979 SUPERFAMILY Periplasmic binding protein-like II 446 819 - -
Acco05g2148 979 SMART GluR_14 469 818 IPR001320 GO:0015276|GO:0016020
Acco05g2148 979 MobiDBLite consensus disorder prediction 907 943 - -
Acco05g2148 979 FunFam Glutamate receptor 467 586 - -
Acco05g2148 979 Gene3D - 66 159 - -
Acco05g2148 979 CDD GluR_Plant 466 816 - -
Acco05g2148 979 MobiDBLite consensus disorder prediction 899 979 - -
Acco05g2148 979 FunFam Glutamate receptor 365 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2148 Acco-ChrAcco05 37664577 37668456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2148 13 934 Ion Channels AT2G29120 50.429 0.0 873