Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2147 ATGGAGCATGACCTTATGGAGGACATGGATTTAGAAGTCCTCCCTTCAATGTGGCCAGAAGATATTGGAACTGATGCAGGGAAACAGTTCAACATAGAGAAGCCTGGAAGTGACCAAGACATGTTAGAGGAGGTCACAATAGTGGAGGAGCCAACTATAGTAGATTTCAAGCGTCTCATGGAGCTCACTAACTATACAGACAGAGGGTCAACTCAGTTGACCTATTTCATGAAATACTTGGAGTACAAGCAGGCTAATGCCGCGCGTCTCTTGCGAGAAGAACTCGACAACCTAAGCAAACAAAGACAGGAAGTTGAGTTCAGGAAGTTGAAGATATTGGAAGAGCACCGGTTCGAGGACATAAGATATGGGGATGATAAAAGACCAGTTTCTATATTGGATGAAGTTTATGACATATGGCAAGATAGGCCTCGCAGGAAAAATGATGTTGTTGTTCAGAACAAGGGTATTGAAATAGATGCGGAGTATGATTCTGTTGTGTACTGGAAGCAAAGGGCCCTGCATTTGGAAAAATTGTTGGAGGCAAGTATTCAGAGAGAGCAGACACTTATGGAGAAGCTGGAAGAAAGCATAAAGAATCTTGAGAGACAGTCCACTCCTGTAGAAGAATTGTCACAGATTCTGAAAAGAGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCTGTTGTCATAGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAACCATTTCCCAAGACTGCAAGAGGAGGACATTATAGGAAGAACAGATGTGGAAATTTTCACGGGGTCTGGAGTCAGGGAATCTCAAGATTTTAAGAGAGAAGTTCTGGAAAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTAATTTATGTAGAACCTGTCTTTAGCAAAGCAGGGCAGACAATTGGGATAAATTACATGGGAATGGATGTAACAGATCAGGTGCGAAAAAGAGAAAGAATGGCACAGATTAGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAGACTGAATTAAATAAGACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGCTAGCAACCATGTCCCATGAAATAAGATCTCCACTGTCGGGGGTTGTTAGCATGGCTGAGATTCTTTCTACTACAAAACTTGACAAGGAGCAAAGACAGCTCTTGGAAGTCATGCTTTCCTCAGGAGATTTGGTTCTTCAACTTATAAATGACATATTAGACCTTTCGAAGGCTGAGTCAGGAGCCATGAAATTGGAAGCTACCAAATTCCGTCCGAGAGAGGTAGTGAAGCATGTACTACAGACTGCTGCAGCATCATTGCAGAAAATATTAACCCTAGAAGGTCATGTGGCTGATGATGTACCCATTGAGGTCATTGGAGATGTTTTAAGGATCCGGCAAATTCTCACAAACCTCACAAGCAATGCAATCAAGTTTACCCATGAAGGTAAGGTTGGCATAAATCTCTACGTTGTAGCACAGCCCAATTTTGGACAATCAGAAGGTCTCCAAAAGATTAGTGGAGACAAGTCAAATGCATCAGTAAGTGGATTATCGGAAGAGAAATACTTCTCAGCATCTCAAAATGGGAGTAGTGATAAATGTAGATCTCCCGTTAAAAGCGAATGCTCAAGGAATGGGGATACAGAGGAGCAACCTCATTCAACCGAAACTACAGTGTGCATACGTTGTGATGTATATGACACTGGAATTGGAATACCAGAAAAAGCAATTCCTACTTTATTTAAAAGGTACATGCAAGTCAGTGCAGATCACGCTCGAAAGTATGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAACTGGTCGAATTAATGGGTGGTCGTCTAACAGTGTCAAGCAAAGAACACTGTGGTTCTACATTTACGTTCATACTCCCGTACAAGGTTTCTATTGCTCGTGATAATTCAGATGACCCCAACGACGAGCTCTCAGATATGGAGAACGGCGACGCTGCTTCTGATGACGCCACACAAGGATTCTTCCAATTCCAACCACGTACATTGGGCTCACTTTTCTCCTCCAACGGATCTACCAGAGCCCTAAAGTTGTTACCCCATAAACTTGGGCTCACACTCCCTCAGAACTTGAATGGGTTTTCGCAGAATTCTTACCCTCTCCCCTCTAACAACGTCGCTTCAAATGGAACAGCTTCAGTTGAAGATGTAATACAAGGGACGACAGTAACGGACTCGCCCGAGGTGTCTGAATCAGGAAGCTCAACGAGTCATAAGCCAGAAACAGAGAACGAAAATGTGGTTAGTAGAGACAAATGTGCTCAACTCCAGAATGGCATTGCAAGTAGAGAAATTGGTGTGGAAACAAAGCCAAGCAAAATCCAGCAATCAAGTGAGACACAAGAGAAGGATAACAGAACTTGTCAATGTGTTACTGGCAGAAGTGATAGTACATCAACAGTGGCCAAACCTCCATTAGAGCCTAAGATCCTTCTAGTTGAAGATAACAACGTCAACGTTATGGTGGCACGCTCGATGATGAAGCAGTTAGGTCACAGCATAGACGTGGTCAATAATGGAGTGGAAGCTGTTCGTGCAGTTCAGCGCAGGAATTATGACCTTATTCTGATGGATGTGTGCATGCCAGTTATGAATGGTCTTGAAGCAACAAAATTGATTCGCTCTTATGAGGAAACTGGCAATTGGGATGCTGCAACAAAAGCTGGAATTGACCCAAGCATCTCAACTTCAGATTTGCAGAAATCTGAGCCTTCCACAAAGCGAATGCCCATTATTGCAATGACGGCGAATGCTTTATCAGAGAGTGCGGAAGAGTGTTACGCAAATGGAATGGACTCATTTGTGTCAAAACCTGTGACTTTCCAGAAATTGAGGGAGTGCCTTGAACAATTCCTTCGGTGA 2955 0.4288 MEHDLMEDMDLEVLPSMWPEDIGTDAGKQFNIEKPGSDQDMLEEVTIVEEPTIVDFKRLMELTNYTDRGSTQLTYFMKYLEYKQANAARLLREELDNLSKQRQEVEFRKLKILEEHRFEDIRYGDDKRPVSILDEVYDIWQDRPRRKNDVVVQNKGIEIDAEYDSVVYWKQRALHLEKLLEASIQREQTLMEKLEESIKNLERQSTPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPRLQEEDIIGRTDVEIFTGSGVRESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGQTIGINYMGMDVTDQVRKRERMAQIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKAESGAMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPIEVIGDVLRIRQILTNLTSNAIKFTHEGKVGINLYVVAQPNFGQSEGLQKISGDKSNASVSGLSEEKYFSASQNGSSDKCRSPVKSECSRNGDTEEQPHSTETTVCIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTFILPYKVSIARDNSDDPNDELSDMENGDAASDDATQGFFQFQPRTLGSLFSSNGSTRALKLLPHKLGLTLPQNLNGFSQNSYPLPSNNVASNGTASVEDVIQGTTVTDSPEVSESGSSTSHKPETENENVVSRDKCAQLQNGIASREIGVETKPSKIQQSSETQEKDNRTCQCVTGRSDSTSTVAKPPLEPKILLVEDNNVNVMVARSMMKQLGHSIDVVNNGVEAVRAVQRRNYDLILMDVCMPVMNGLEATKLIRSYEETGNWDAATKAGIDPSISTSDLQKSEPSTKRMPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLRECLEQFLR 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2147 984 SUPERFAMILY PYP-like sensor domain (PAS domain) 211 329 IPR035965 -
Acco05g2147 984 Gene3D - 354 432 - -
Acco05g2147 984 SUPERFAMILY CheY-like 839 984 IPR011006 -
Acco05g2147 984 MobiDBLite consensus disorder prediction 800 833 - -
Acco05g2147 984 Coils Coil 88 108 - -
Acco05g2147 984 FunFam Histidine kinase 5 209 344 - -
Acco05g2147 984 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 421 653 IPR036890 -
Acco05g2147 984 Gene3D - 837 984 - -
Acco05g2147 984 FunFam Putative histidine kinase 5 355 432 - -
Acco05g2147 984 ProSiteProfiles Response regulatory domain profile. 840 983 IPR001789 GO:0000160
Acco05g2147 984 CDD REC_hyHK_CKI1_RcsC-like 841 979 - -
Acco05g2147 984 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 366 432 IPR036097 GO:0000155|GO:0007165
Acco05g2147 984 MobiDBLite consensus disorder prediction 752 833 - -
Acco05g2147 984 CDD HATPase_EvgS-ArcB-TorS-like 483 652 - -
Acco05g2147 984 SMART HKATPase_4 478 655 IPR003594 -
Acco05g2147 984 Pfam His Kinase A (phospho-acceptor) domain 369 432 IPR003661 GO:0000155|GO:0007165
Acco05g2147 984 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 9 983 - -
Acco05g2147 984 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 653 IPR003594 -
Acco05g2147 984 Gene3D - 433 658 IPR036890 -
Acco05g2147 984 MobiDBLite consensus disorder prediction 752 773 - -
Acco05g2147 984 MobiDBLite consensus disorder prediction 556 570 - -
Acco05g2147 984 CDD HisKA 369 428 IPR003661 GO:0000155|GO:0007165
Acco05g2147 984 Coils Coil 177 211 - -
Acco05g2147 984 Gene3D PAS domain 209 344 - -
Acco05g2147 984 SMART HisKA_10 367 432 IPR003661 GO:0000155|GO:0007165
Acco05g2147 984 FunFam Histidine kinase 5 833 984 - -
Acco05g2147 984 MobiDBLite consensus disorder prediction 543 572 - -
Acco05g2147 984 Pfam Response regulator receiver domain 841 910 IPR001789 GO:0000160
Acco05g2147 984 PRINTS Bacterial sensor protein C-terminal signature 580 594 IPR004358 GO:0016310|GO:0016772
Acco05g2147 984 PRINTS Bacterial sensor protein C-terminal signature 615 633 IPR004358 GO:0016310|GO:0016772
Acco05g2147 984 PRINTS Bacterial sensor protein C-terminal signature 639 652 IPR004358 GO:0016310|GO:0016772
Acco05g2147 984 ProSiteProfiles Histidine kinase domain profile. 374 655 IPR005467 -
Acco05g2147 984 SMART REC_2 839 979 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2147 Acco-ChrAcco05 37658079 37662662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2147 1 984 Histidine Kinase Gene Family AT5G10720 59.476 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco05g2147 HATPase_c 1.6e-26 CL0025