Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2132 ATGTATCAGGAGATGCATCTGCAGCGATTAAGTTCAGCATTTTATCAGATCATCAGAACCGCAACCATCAAAGCTCCTCCTCTTCCTGCATCATGTGATGGCTTCCCGTCCCTGTCTTCTGCTTATAACTCTAGAAAAATGAATAATGACGGAAAAAAAGGCACAACATGGGTTGGTTTCTTATGTGAAAATGTCCTATTGCTATTTTACTGCGCAAGTAAAATAGCAGTAGGTCAGCCTAGAAACAAACTATTTGCTTACCACGTTATTTTGAATGATGACCAAAAGCGGAATCGTGTTTGCTTCCATCGAAAAGAATGTTACTGCGAGATGAGGCAGACTCGCAAGCCGTGGCGGAGGGATTAAGGCGAAAACGTCAAGGACGATAACGTTAACGGCGTGACGGGGTTACTGAGGAGTGATGGGGCCCGCGCGGGAATCATGATGAGTAAGCGATGTCAGACCCACAGGGGCGTTATGGCATTTCGGTTTGGACTTGTTCTTCTGGCTTTTTTCATTTGTTTGAACTTCGTCTCGGTGGATTCAGACGATGGAGCAACATTACTAGAGATAAAGAAGTCGTTCAGGGACGTGGATAATGTTCTATGTGACTGGACTGACTCTCCATCTTCCGATTATTGTGTCTGGAGAGGGGTCACATGCGATAATGTCACCTTCAATGTTGTTGCCCTAAACCTCTCAAGTTTGAATCTGGACGGCGAAATCTCACCTGCAATAGGGGGCCTTAAGAGCTTGGTCTCCATCGACTTTAGGGGGAACCTATTATCAGGCCAGATTCCAGATGAGATTGGTGACTGTTCTTCTTTGAAGAGCTTGGACTTATCATTTAATGAAATCCGGGGAGACATACCATTTTCTATTTCAAAGTTGAAACAACTGGAAAATCTAATTTTGAAAAATAATCAGTTAATAGGACCCATTCCTTCTACATTGTCTCAGATTCCCAACTTGAAGATTCTGGACCTGGCTCAAAACAATCTTAGCGGTGAAATACCAAGGCTTATATACTGGAACGAAGTCTTGCAATATCTTGGCTTGCGAGGGAACAATTTAGGGGGTTCACTCTCTCCTGACATGTGCCAGTTAACTGGACTATGGTATTTTGATGTGAGGAACAACAGCTTGACTGGCAGTATTCCTGGAAGTATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCAACTGACTGGAAAGATACCATTCAATATTGGGTTTCTTCAAGTTGCAACATTGTCATTGCAAGGCAATAAACTCTCTGGACCTATTCCATCAGTGATTGGGCTGATGCAAGCACTTGCTGTATTAGATTTGAGTTGTAACAAGCTAAGTGGACCAATCCCTCCTATCTTGGGAAATTTGACATACACTGAAAAATTGTATTTGCATGGGAATAAACTGTCTGGACCCATTCCCCCAGAGCTCGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTGAGTGGACATATCCCACCGGAGCTTGGAAAGCTTACCGATCTCTTTGATTTAAATGTCGCTAACAACAACCTTGAGGGGCCAATTCCTGATAATATAAGCTCATGCAAAAATCTCAACAGCCTCAATGTGCATGGAAACAAGTTAAATGGAACAATCCCCCCAACTTTTCAGAGCTTAGAGAGTATGACGTATCTGAATCTTTCCTCCAACAAACTTCGGGGCCCCATTCCAATTGAGCTATCAAGGATTGGTAATTTGGATACGTTGGATATTTCAAATAACAATATAAGTGGTTCCATTCCTTCTTCACTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAATCATATAACTGGGTTTATTCCCTCCGAGTTTGGTAATTTAAGAAGTGTTATGGATATAGATCTATCAAATAACCAGCTCTCTGGCTTGATTCCTCAAGAACTTAGTCAGCTGCAGAATATGATATACCTGAGACTGGAAAACAACAATCTATCCGGGGATGTGACTTCTCTTATAAATTGCCTTAGCCTTTCTTTACTCAATGTGTCCTATAACAACCTAGTTGGTGTCATTCCCACAAGCAATAATTTCTCCAGGTTTTCTCCAGACAGTTTTATTGGAAACTCTGGTCTCTGTGGCTATTGGATGACTTCACCTTGTCATAAATCTCATCCCACAGAACGAGTTACATTATCTAAGGCAGCCATCCTAGGAATTGCTCTAGGTGCCCTTGTGATTCTTCTTATGATATTACTAGCAGCATGTCGGCCATACAATCCATCCCCATATCCTGATGGATCACTTGACAAGCCAGTTAATTATTCACCGCCAAAGCTAGTGATTCTTCATATGAACATGGCCCTTCACGTTTATGAGGATATTATGAGGATGACCGAAAACCTGAGTGAGAAGTACATAATCGGATATGGTGCATCAAGCACAGTATATAAATGCGTCCTCAAGAATTGCAAGCCAGTAGCTATCAAGAGGCTCTATTCTCACTATCCCCAAAGCTTGAAGGAATTTAAGACAGAACTTGAGACAGTTGGTAGCATCAAGCACCGAAACCTGGTTAGTCTCCAAGGTTACTCCTTGTCTCCTTACGGAAACCTTCTCTTCTATGACTATATGGAAAATGGCAGTCTATGGGATCTTCTCCATGGAGCTTCTAAAAAGAAAAAGCTTGACTGGGACCTTCGTTTAAAGATAGCACTAGGAGCAGCACAAGGGCTTACGTATCTACACCATGATTGTTGCCCCCGGATCATCCACAGGGACGTGAAATCATCAAATATTCTGTTGGACAAGGACTTTGAGGCCCATCTCACTGACTTTGGCATCGCTAAAAGTCTATGCCCCTCCAAATCCCACACTTCAACTTACATAATGGGCACAATCGGTTATATAGACCCTGAATATGCTCGAACTTCCCGTCTCACTGAGAAGTCTGATGTTTATAGTTTTGGCATTGTTTTACTTGAGTTGCTCACTGGCAGGAAAGCTGTGGACAATGAATCCAATCTCCACGACCTGATTTTGTCAAAGACAGCAAACAATGCTGTAATGGAGACGGTTGATCCTGATATTACTGCCTCATGTAAGGACATGGGAGCAGTGAAAAAGGTATTTCAGCTAGCCCTTTTGTGCACTAAGAGACAACCAGTTGATAGGCCGACAATGCACGAGGTGATGCGCGTGTTGGGAAGCCTTGTACTACCCACCTCCCCTCCAAAACAAGCAGCCCCACCTCCTGCAGCTTCTGCTCTGCTTCCATCGGCAAAGGTGCCATCTTGCTACATGGATGAGTATGCAAATCTGAAGGCTCCACACCTGGTGAACTGCCCCTCCATGAGCACCTCTGATGCCCAGCTCTTTCTCAAATTTGGGGAGGTAATTTCTCAGAACAGTGAATGA 3429 0.4313 MYQEMHLQRLSSAFYQIIRTATIKAPPLPASCDGFPSLSSAYNSRKMNNDGKKGTTWVGFLCENVLLLFYCASKIAVGQPRNKLFAYHVILNDDQKRNRVCFHRKECYCEMRQTRKPWRRDXGENVKDDNVNGVTGLLRSDGARAGIMMSKRCQTHRGVMAFRFGLVLLAFFICLNFVSVDSDDGATLLEIKKSFRDVDNVLCDWTDSPSSDYCVWRGVTCDNVTFNVVALNLSSLNLDGEISPAIGGLKSLVSIDFRGNLLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLWYFDVRNNSLTGSIPGSIGNCTAFQVLDLSYNQLTGKIPFNIGFLQVATLSLQGNKLSGPIPSVIGLMQALAVLDLSCNKLSGPIPPILGNLTYTEKLYLHGNKLSGPIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPDNISSCKNLNSLNVHGNKLNGTIPPTFQSLESMTYLNLSSNKLRGPIPIELSRIGNLDTLDISNNNISGSIPSSLGDLEHLLKLNLSRNHITGFIPSEFGNLRSVMDIDLSNNQLSGLIPQELSQLQNMIYLRLENNNLSGDVTSLINCLSLSLLNVSYNNLVGVIPTSNNFSRFSPDSFIGNSGLCGYWMTSPCHKSHPTERVTLSKAAILGIALGALVILLMILLAACRPYNPSPYPDGSLDKPVNYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQSLKEFKTELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDLLHGASKKKKLDWDLRLKIALGAAQGLTYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHDLILSKTANNAVMETVDPDITASCKDMGAVKKVFQLALLCTKRQPVDRPTMHEVMRVLGSLVLPTSPPKQAAPPPAASALLPSAKVPSCYMDEYANLKAPHLVNCPSMSTSDAQLFLKFGEVISQNSE 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2132 1142 Gene3D Phosphorylase Kinase; domain 1 779 881 - -
Acco05g2132 1142 ProSiteProfiles Leucine-rich repeat profile. 275 298 IPR001611 GO:0005515
Acco05g2132 1142 ProSiteProfiles Leucine-rich repeat profile. 323 345 IPR001611 GO:0005515
Acco05g2132 1142 SMART serkin_6 806 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2132 1142 Gene3D Transferase(Phosphotransferase) domain 1 882 1079 - -
Acco05g2132 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 777 881 - -
Acco05g2132 1142 ProSitePatterns Protein kinases ATP-binding region signature. 812 834 IPR017441 GO:0005524
Acco05g2132 1142 Gene3D Ribonuclease Inhibitor 419 504 IPR032675 -
Acco05g2132 1142 Gene3D Ribonuclease Inhibitor 601 727 IPR032675 -
Acco05g2132 1142 ProSiteProfiles Protein kinase domain profile. 806 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2132 1142 SUPERFAMILY L domain-like 183 465 - -
Acco05g2132 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Acco05g2132 1142 Gene3D Ribonuclease Inhibitor 505 600 IPR032675 -
Acco05g2132 1142 Gene3D Ribonuclease Inhibitor 181 344 IPR032675 -
Acco05g2132 1142 SUPERFAMILY Protein kinase-like (PK-like) 783 1072 IPR011009 -
Acco05g2132 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 456 728 - -
Acco05g2132 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 882 1083 - -
Acco05g2132 1142 SMART LRR_typ_2 488 512 IPR003591 -
Acco05g2132 1142 SMART LRR_typ_2 560 584 IPR003591 -
Acco05g2132 1142 SMART LRR_typ_2 608 631 IPR003591 -
Acco05g2132 1142 SMART LRR_typ_2 632 655 IPR003591 -
Acco05g2132 1142 SMART LRR_typ_2 321 345 IPR003591 -
Acco05g2132 1142 SMART LRR_typ_2 440 464 IPR003591 -
Acco05g2132 1142 SMART LRR_typ_2 249 273 IPR003591 -
Acco05g2132 1142 SMART LRR_typ_2 369 393 IPR003591 -
Acco05g2132 1142 Gene3D Ribonuclease Inhibitor 345 418 IPR032675 -
Acco05g2132 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 181 345 - -
Acco05g2132 1142 Pfam Leucine rich repeat N-terminal domain 182 222 IPR013210 -
Acco05g2132 1142 SUPERFAMILY L domain-like 418 705 - -
Acco05g2132 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 346 455 - -
Acco05g2132 1142 PANTHER LEUCINE RICH REPEAT KINASE 2 390 1076 - -
Acco05g2132 1142 Pfam Leucine rich repeat 586 645 IPR001611 GO:0005515
Acco05g2132 1142 Pfam Leucine rich repeat 518 573 IPR001611 GO:0005515
Acco05g2132 1142 Pfam Protein kinase domain 809 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2132 1142 ProSiteProfiles Leucine-rich repeat profile. 586 609 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2132 Acco-ChrAcco05 37519110 37530946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2132 417 697 Receptor kinase-like Gene Family AT5G07180 37.908 7.44e-44 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Acco05g2132 Pkinase 1.5e-43 CL0016