Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2122 ATGGGGAGGACTCCTTCACGCAGTAATAATGATGAAGCGCAGAGAAGGGAGGCTTGGACTGCTCGTGAAGACAAAATCCTGGCCTCTTATATCGGGTCCCATGGCGAAGGCAAATGGCAAAACATCCCCAAACGAACTGGTCTCAGGAGATGTGGCAAATCTTGTAGGCTTCGCTGGATGAATTACCTTCGGCCTGACATCAAAAGAGGCAACATCACTGAAGACGAGGAAGACCTCATTCTCAGGCTCCACAACCTCCTGGGCAACAGATGGTCCCTCATAGCAGGCAGACTTCCAGGGCGAACAGACAATGAAATAAAAAACTACTGGAACACCAACTTAGCCAAGAGGCGGCCAAAGGATACGTCTCAAAATGAGAAAAAGGAAAATGCAGAATCAAGAGTGTCCCATGAGGCTTTGGAGTCGCCGAGCACTCAAGTGGTCTTAGCCACGTCAACTCCGAGGGAACCCAGGACTGAGTATTGTGGCGATTCTGATGTTGCTACAGGGGAATCTGTTGCTTTTGATGGTCAATCGTCGTCAGCGGAAGAAAACGTTGATGGGGCTTTGATCGATTTTGATTTCAAGGATGTGGACTTGCTGGAGTTTCTGGACTTTGATTTTTCCGGACTTGCAGATTTTGACATGTTGATGGACATGGACGATCCGAAACAAGAAGGAAGGCAGAGTGGTTCTTAG 699 0.4835 MGRTPSRSNNDEAQRREAWTAREDKILASYIGSHGEGKWQNIPKRTGLRRCGKSCRLRWMNYLRPDIKRGNITEDEEDLILRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNLAKRRPKDTSQNEKKENAESRVSHEALESPSTQVVLATSTPREPRTEYCGDSDVATGESVAFDGQSSSAEENVDGALIDFDFKDVDLLEFLDFDFSGLADFDMLMDMDDPKQEGRQSGS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2122 232 MobiDBLite consensus disorder prediction 119 136 - -
Acco05g2122 232 SMART sant 15 65 IPR001005 -
Acco05g2122 232 SMART sant 68 116 IPR001005 -
Acco05g2122 232 CDD SANT 73 114 IPR001005 -
Acco05g2122 232 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Acco05g2122 232 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Acco05g2122 232 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Acco05g2122 232 FunFam MYB-related transcription factor 15 68 - -
Acco05g2122 232 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 151 - -
Acco05g2122 232 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Acco05g2122 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Acco05g2122 232 MobiDBLite consensus disorder prediction 137 153 - -
Acco05g2122 232 Gene3D - 7 68 - -
Acco05g2122 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Acco05g2122 232 Gene3D - 73 141 - -
Acco05g2122 232 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Acco05g2122 232 MobiDBLite consensus disorder prediction 114 166 - -
Acco05g2122 232 CDD SANT 18 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2122 Acco-ChrAcco05 37447723 37448598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2122 13 225 MYB Transcription Factor Family AT3G13540 46.575 1.51e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g2122 Myb_DNA-binding 3.8e-13 CL0123