Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2119 ATGGGGAGATGTCCATGTCTCTCAGACAAAGGAGAAGGGCTGAAAAGAGAAGCATGGACTGATGAAGAAGACAAGTTACTCAGTTGTTACATTATGGCCTACGGCAAAGGCAAATGGACTCAGGTCCCTAAAGCGGCTGGCTTGAACAGGAGTGGCAAAAGCTGTAGACTCAGATGGCTGAAATATCTCAGGCCTGACATTAAGCGAGGAAACATCACTGGCGATGAAGAAGATCTCATCATTAGGCTCCATAAACTTCTTGGCAACAGATGGTCTCTCATAGCTGGAAGGATACCGGGACGAACGGACAATGAAATAAAAAACTACTGGAACACAACTTTGTCGAAGAAGCTTAGAACACAATCATGTGTAACGACGACTGAACAACATCAATCGAACAAGTGGACGGCAAGGGAGCCTTCCGATACTCTGTCAGCAGCTATCCAAACAAAGCCTTGGAAATGCAAAAATGTGGTTATGCGACATCCTCCATGTCACCAGATAGGGTTTCAGGAAGCTGACGTAACAACCCAGCTTTGCACTAATCAATCTCAAAACTCATCACCTCCTTCAGGGTCTCGAGTTAATGATGTCCATGAACATCATCAGTTTAATCAAAATGATAGCTTTGACGTGAATTTGTTGAGCCTTGGAAACAATAATGTTTTTTGCACGGACTTCAATTGTGAGAGCAGTGTAGCCATGGATGCTCACAATGATCTCTGCCAGCCTATTGACCAAGTTATGTTCAGTGGTGATTGGACCACGAGTTGCTTTGAGGTCGACATCGATAGTATTGGCTCTTATTGGGATATGGATTCATTGGCCCTCCTCCTGGAATCTGAGGTTTCGGACTTGAGTCCTGTGAATTCATGA 876 0.4452 MGRCPCLSDKGEGLKREAWTDEEDKLLSCYIMAYGKGKWTQVPKAAGLNRSGKSCRLRWLKYLRPDIKRGNITGDEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEIKNYWNTTLSKKLRTQSCVTTTEQHQSNKWTAREPSDTLSAAIQTKPWKCKNVVMRHPPCHQIGFQEADVTTQLCTNQSQNSSPPSGSRVNDVHEHHQFNQNDSFDVNLLSLGNNNVFCTDFNCESSVAMDAHNDLCQPIDQVMFSGDWTTSCFEVDIDSIGSYWDMDSLALLLESEVSDLSPVNS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2119 291 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 190 - -
Acco05g2119 291 Gene3D - 72 142 - -
Acco05g2119 291 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Acco05g2119 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Acco05g2119 291 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Acco05g2119 291 SMART sant 68 116 IPR001005 -
Acco05g2119 291 SMART sant 15 65 IPR001005 -
Acco05g2119 291 CDD SANT 73 114 IPR001005 -
Acco05g2119 291 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Acco05g2119 291 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Acco05g2119 291 CDD SANT 18 63 IPR001005 -
Acco05g2119 291 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Acco05g2119 291 Gene3D - 17 68 - -
Acco05g2119 291 FunFam Myb transcription factor 16 68 - -
Acco05g2119 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2119 Acco-ChrAcco05 37395169 37396262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2119 13 129 MYB Transcription Factor Family AT3G13540 66.667 7.72e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g2119 Myb_DNA-binding 7.4e-15 CL0123