Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2114 ATGAGCATGGCGGATAAGAAAATAGTCAACGACGGAGAAGTGGCGGTGACCATTCCGGTCCAGCAGAATCCTAATCTTACTGGAGACAGTCCAACCTCCAAAGTGACTGAATCTCACTTAAAGCCCCAAGCTTTAGGTCATGTTACCCCTGATATAAAGCCCAGCTCCGCCCAAACAAGCCTGCTGAATTTTCTGCTACAAACCGAAACCTTGTTCGCAGGAAGACCCACAAAGAGTCCATCTGGTCCGCCATTGATAGAGGAGGCTGAGAAGGTTGGTAGATCACCGAGTTTTGGCCAGATGAAACGGGAAAAAGTTTCTGCTTGGACAATTAAGATTTTGGTTGATGCAGTGGCAAACTCAAGGCTGACCACAATCTCTAGTGATCAGAGACTGGACGGATCGGATAGACAGAAAGGCTCTGACAAGCTGGGTGGACTTCAGGTGAAGGTCTATCAGGAACGAAAGGCATTGGCACATGCCTTAACCGACACCAAGACTGCTGTTAAGCAATTGAACGAGCTTGTGTCAGGGATCCTTGTTATTTTGATCATAATTGTGTGGCTTCTACGGATGGAGATTGCAACAACAAAAGCTCTCGTATTTGTGTTTGTGATGCATCCATTTGATGTTGGCGACCGATCTGTTGTCGATGGGGTTCCCCTGTTGGTTGAAGAAATTAACACCTTGACAACGGTATTCTTGAAACTTGACAATGAGAAGGTGTTCTACCCAAACTCAATTCTGGCGACTAAAACCATTAGCAATTATCACAGAAGCCCTGATATGAGTGACGCTGTAGAGTTTTCAACTGACTTCATGACAACATTGGAGAGGATTGGAGCAATGAAGAAAAAAATAGAGAGGTACTTGGAGAGAAATCCGCAACACTGGCATCCTAATCACATAGTGATGGTGAAGGAGATAGAAAATGTGAATAAGATTAAAATAACTTTGTATGCTAACCATACAATGAATTTTCAAGACTACGCGTAG 996 0.4408 MSMADKKIVNDGEVAVTIPVQQNPNLTGDSPTSKVTESHLKPQALGHVTPDIKPSSAQTSLLNFLLQTETLFAGRPTKSPSGPPLIEEAEKVGRSPSFGQMKREKVSAWTIKILVDAVANSRLTTISSDQRLDGSDRQKGSDKLGGLQVKVYQERKALAHALTDTKTAVKQLNELVSGILVILIIIVWLLRMEIATTKALVFVFVMHPFDVGDRSVVDGVPLLVEEINTLTTVFLKLDNEKVFYPNSILATKTISNYHRSPDMSDAVEFSTDFMTTLERIGAMKKKIERYLERNPQHWHPNHIVMVKEIENVNKIKITLYANHTMNFQDYA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2114 331 SUPERFAMILY Sm-like ribonucleoproteins 198 257 IPR010920 -
Acco05g2114 331 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 149 330 IPR016688 -
Acco05g2114 331 MobiDBLite consensus disorder prediction 73 96 - -
Acco05g2114 331 Pfam Mechanosensitive ion channel 201 321 IPR006685 GO:0016020|GO:0055085
Acco05g2114 331 Gene3D - 208 257 IPR023408 -
Acco05g2114 331 FunFam Predicted mechanosensitive ion channel 208 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2114 Acco-ChrAcco05 37348038 37354454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2114 69 329 Mechanosensitive Ion Channel Family AT5G12080 41.019 2.85e-85 270