Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco05g2112 | ATGAACACGACTTTCGGAGACAGCCCTCAAATTATGCAGAGTTTAACTTCGCCACAACTGTCTCGGCAATCATCCAAAGCGAGTAGCAAGCATAAGCAATTAGTGGAGGCATCAAGCCCTGTTCCTAGTGGATGCTGCCGAGGTTTCGGTAATGTCAAGACCACGGGACCAACCTTGTCAGCTTTGCAATACCAGCAGCAGCTCCAACATTCCAAGAGATTGGAAGGAAAGGTGGAAGATTTGGAGAAAGAAGTGCGGAGGCAGAAAGAGCTGCGAGTGATGTATAGGAAAAGGATGGAAAGAACACAGGACTATCTAAGATACTGCCTCCAAATAGCACAAGAGAATGGTATATTGCACCTCATCACCCACTCCAAAGGCGACCTCCAACAATCCCCTATATCAGTTCACACCGTCAACTCCGCCGCCAGTCCTCAGATTCCCTCTCCCATCCACCGCCACCACCATCACCACCCTGATCTAGCAGCCATCATTGAACAAGCCAAAATCCAAGGATGGCACATTGATCCTACTGAGGTTCAATTGGAGGAGAAGATAGGACAGGGAAGCACGGCGGAGATATACAGAGCAACTTGGCGAGGATATGATGTGGCGGTGAAGTGCTTATCTGCGGATTTTTTCAGGACCAACGCAAATGGCGTCGTATTTTTTGCTCAAGAGGTGGAAACTCTGTCGAGGCAGAGGCACAGATTTGTGCTTCAGCTGATGGGGGCATGCCTAGAGCCTCCCCACCACGCCTGGGTGGTCACCGAGCACGTCAGCACCACCCTCAAAGACTGGCTTCACGGCGCCGGCAAGAGAAGCAGAGTCAGGCAGGTCCCACTTCCTTCCCTGAAGGACAGGGTGATGAGGGCTCTGGAGATCGCTCAAGCCATGCAGTATCTGCATGAACAAAAGCCCAAGATCATCCACCGTGACCTCAAACCCAGCAACATTTTCTTGGACGATGCCCTCCACGTCAGGATAGCCGATTTCGGCCATGCCCGCTTCTTGGCTGACCACGAAATGGCCCTCACCGGCGAAACAGGCATGCCATATATATACATACACGCTCTCTCTCTTAATTGA | 1089 | 0.5142 | MNTTFGDSPQIMQSLTSPQLSRQSSKASSKHKQLVEASSPVPSGCCRGFGNVKTTGPTLSALQYQQQLQHSKRLEGKVEDLEKEVRRQKELRVMYRKRMERTQDYLRYCLQIAQENGILHLITHSKGDLQQSPISVHTVNSAASPQIPSPIHRHHHHHPDLAAIIEQAKIQGWHIDPTEVQLEEKIGQGSTAEIYRATWRGYDVAVKCLSADFFRTNANGVVFFAQEVETLSRQRHRFVLQLMGACLEPPHHAWVVTEHVSTTLKDWLHGAGKRSRVRQVPLPSLKDRVMRALEIAQAMQYLHEQKPKIIHRDLKPSNIFLDDALHVRIADFGHARFLADHEMALTGETGMPYIYIHALSLN | 362 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco05g2112 | 362 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Acco05g2112 | 362 | Gene3D | Transferase(Phosphotransferase) domain 1 | 261 | 355 | - | - | |
| Acco05g2112 | 362 | Coils | Coil | 64 | 98 | - | - | |
| Acco05g2112 | 362 | SUPERFAMILY | Protein kinase-like (PK-like) | 159 | 344 | IPR011009 | - | |
| Acco05g2112 | 362 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 309 | 321 | IPR008271 | GO:0004672|GO:0006468 | |
| Acco05g2112 | 362 | SMART | serkin_6 | 180 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco05g2112 | 362 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 61 | 352 | - | - | |
| Acco05g2112 | 362 | Gene3D | Phosphorylase Kinase; domain 1 | 168 | 260 | - | - | |
| Acco05g2112 | 362 | ProSiteProfiles | Protein kinase domain profile. | 180 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco05g2112 | 362 | Pfam | Protein kinase domain | 181 | 343 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco05g2112 | 362 | ProSitePatterns | Protein kinases ATP-binding region signature. | 186 | 207 | IPR017441 | GO:0005524 | |
| Acco05g2112 | 362 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco05g2112 | Acco-ChrAcco05 | 37338116 | 37339574 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco05g2112 | 178 | 352 | MAP Kinase Kinase Kinase | AT5G03730 | 35.795 | 1.45e-26 | 109 |
Transcription factors information