Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2105 ATGGCAGACAGTAATCCTCCGAGACCACCAGAGAGCGATTTCACAAACCAGAATCCTTTTGATGAGTTCTCTGAATTCTTCATCTTCGAGGATGATGATGAGGAACCTGACCATTCAATGATGAGTTCTGAACAACCTGACCATTCAATGATGAGTTCTGAACAACCTGACCATTCAATGATGAGTTCTGAACAAGTCCCCGTTCAGCAGGTCTCTCAAAGCATTGAAGAGAAATTAGCAGTAGTGGGGAGAGGGACATCAAAGACAGATTTGCGTTCAAGACAAGGTCGGAGGAATTACTATAAGTGTTCAGTGGAGGGATGCCCGGTGAAAAAGAGAGTTGAGAGAGATAAGGACGATCCAAGTTATGTTATAACAACCTACGAGGGTGTCCACACCCACCCAAGCTTTAGCTAG 417 0.446 MADSNPPRPPESDFTNQNPFDEFSEFFIFEDDDEEPDHSMMSSEQPDHSMMSSEQPDHSMMSSEQVPVQQVSQSIEEKLAVVGRGTSKTDLRSRQGRRNYYKCSVEGCPVKKRVERDKDDPSYVITTYEGVHTHPSFS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2105 138 ProSiteProfiles WRKY domain profile. 84 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2105 138 Gene3D WRKY domain 62 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g2105 138 SUPERFAMILY WRKY DNA-binding domain 93 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g2105 138 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 135 IPR044810 GO:0003700
Acco05g2105 138 Pfam WRKY DNA -binding domain 92 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2105 138 MobiDBLite consensus disorder prediction 43 72 - -
Acco05g2105 138 SMART WRKY_cls 88 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g2105 138 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2105 Acco-ChrAcco05 37269553 37270364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2105 84 138 WRKY Transcription Factor Family AT5G64810 63.636 3.42e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g2105 WRKY 1e-13 CL0274