Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2098 ATGTCAGCCCACCAGCCATTTGACGGCAGAGCTCTGCCTCTAAACACCACCGTGGTGGCCGTCGACAGAGGCAAGAACAGTCTATATGCCTTCCGGTGGGCACTTAATCATCTTGATAGTGCAGTCTTCGTCGCTCTCCACGTTAGGTCAAAACAAATTCCACCCAATGAGGGCCTCAAGGTTTTACCCCCTGACGAAAGCGATGTAGCCCATGTTTTCTCTGCATTACGAGAATCACGTCCACATAAGGCGGTGACGATAAAAGAAGCCGTAGTTGATGATAGTGATATTGTGAAAGGAATCTCAGTATTTGCAAACAAGCATCACATCGGCAGTATCGTTGTCGGCGCAACGGCTAGCTGGAATTCTCTGGCAAGGAAATTTATAGGTTTTGATTTGCCAACGGCCATAATCAAATCAGCTTCAGATTATACTTCTGTGTACATAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCCCTACGTCCTATGTCAAACATTTGTGTTCGTTCAAAACAACCGAAGGCACTTCAACCAAATGATGTAGAAAACGGAGTAAGGGAACAGGCAGCTAAAAGAGGAGGGATAACAGAGGGATCAGAAAGAACGTCTTCTGAGAGAAACAAGAATGGAGAAATGCACAAGAGTACTGACGGTTCGTCGATGGATAAACTTGACCCATCCAATCGTGGGTTGAAGGCATCGATTAGCGTTGATTCCTTTTCGGATGAAAGTGTTTCATCAGATCTAACTAAGCAAGATTTGGAGTTTAGCTCTTCATCTGATGGCTCCAGGACTTCATCATCTTCCCAGCCCTCAAAAGAAGTAGGAGCTGAAATGAAGAGATTGAGGTTTGAACTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAGGCAATCTCAGCAAAAAATAAGGCCAACGAGATTAATCAATGGAAACTAGAGGAGGCAAGTAAACTTGAGGAAGCTATATTGTCAGGAGAGGCGGCTCTTGCACTAGCAGAAAAGGAGAAGGCTAGAGCCCGAGCTGCCCTAGAAGAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAGATATGCAGAGCTAAAGGCCAGGAAAGAGGCAGAAGAAAAGGACAGAGCCCTAACTGCTTTGGCTAAAAATGATGTTCGATATAGAAAATACGCTATAGAAGAGATCGAATGGGCTACTCAAAAGTTCTCCCCATCTTTCAAAATAGGTGAAGGTGGATATGGGCCTGTGTTCAAAGGTGAACTTGATCTCACCCCTGTTGCGATCAAAATCTTAAGACCTGATGCTTCTCAAGGCAGAAAGCAGTTTCACCAAGAGGTTGAGGTATTATGCTGCATCAGACATCCTAATATGGTCCTCCTCCTTGGTGCCTGTCCTGAGTTTGGCTGTCTGGTTTATGAATACATGGAAAATGGTAGCTTGGAGGACAGATTATTTCGGAAGAACAATAGCCCACCTCTTCCATGGAGGTTGAGGTTCACAATAGCTGCTGAAATTGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCACTTGTTCACCGGGATCTAAAACCAGCAAACATCCTCCTAGACCAGAATTATGTGAGTAAAATCAGTGATGTGGGCCTGGCACGATTGGTTCCGGCTTCTGTAGCTGATTCTGTCACACAATATTACATGACTTCAGCTGCCGGAACCTTTTGCTACATTGATCCGGAGTATCAACAAACAGGGAAGTTAACAACTAAATCAGATATATATTCACTAGGGGTAATGCTGCTACAAATTATCACAGCCAAGCCTCCCATGGGTCTTGCTCACCATGTGAAAAGGGCAATGGCAAGGGGAAAATTTGCAGAGATGCTTGATCCTACATTGACTGATTGGCCAGTTGAGGAGGCTCTAGCATTTGCCAAAGTGGCAGTGAGTTGTGCAGAGCTTAGCAAGAAGGACAGGCCAGACCTTGCAACGGTTGTTGTGCCAGAGCTTAACCGCTTGAGGAATTTTGGCTGCACGTCTCACCCTAGTCCCATTGTCATCAACAAACAGAGTCATAGTCGAGCGGGACACTCTCCTAGTGCTAGACCTCCACGAAATTCATGA 2127 0.4546 MSAHQPFDGRALPLNTTVVAVDRGKNSLYAFRWALNHLDSAVFVALHVRSKQIPPNEGLKVLPPDESDVAHVFSALRESRPHKAVTIKEAVVDDSDIVKGISVFANKHHIGSIVVGATASWNSLARKFIGFDLPTAIIKSASDYTSVYIISKGKIVSARSALRPMSNICVRSKQPKALQPNDVENGVREQAAKRGGITEGSERTSSERNKNGEMHKSTDGSSMDKLDPSNRGLKASISVDSFSDESVSSDLTKQDLEFSSSSDGSRTSSSSQPSKEVGAEMKRLRFELKQTMDMYSSACKEAISAKNKANEINQWKLEEASKLEEAILSGEAALALAEKEKARARAALEEAEEAKKMAEKEAERRRYAELKARKEAEEKDRALTALAKNDVRYRKYAIEEIEWATQKFSPSFKIGEGGYGPVFKGELDLTPVAIKILRPDASQGRKQFHQEVEVLCCIRHPNMVLLLGACPEFGCLVYEYMENGSLEDRLFRKNNSPPLPWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPASVADSVTQYYMTSAAGTFCYIDPEYQQTGKLTTKSDIYSLGVMLLQIITAKPPMGLAHHVKRAMARGKFAEMLDPTLTDWPVEEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFGCTSHPSPIVINKQSHSRAGHSPSARPPRNS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2098 708 Pfam Universal stress protein family 18 130 IPR006016 -
Acco05g2098 708 MobiDBLite consensus disorder prediction 256 276 - -
Acco05g2098 708 MobiDBLite consensus disorder prediction 685 708 - -
Acco05g2098 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Acco05g2098 708 MobiDBLite consensus disorder prediction 256 279 - -
Acco05g2098 708 Coils Coil 320 380 - -
Acco05g2098 708 Gene3D Phosphorylase Kinase; domain 1 386 480 - -
Acco05g2098 708 MobiDBLite consensus disorder prediction 200 222 - -
Acco05g2098 708 Pfam Protein tyrosine and serine/threonine kinase 413 667 IPR001245 GO:0004672|GO:0006468
Acco05g2098 708 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 381 480 - -
Acco05g2098 708 ProSiteProfiles Protein kinase domain profile. 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2098 708 Gene3D Transferase(Phosphotransferase) domain 1 481 680 - -
Acco05g2098 708 MobiDBLite consensus disorder prediction 173 232 - -
Acco05g2098 708 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 119 - -
Acco05g2098 708 CDD STKc_IRAK 414 674 - -
Acco05g2098 708 SMART serkin_6 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2098 708 PANTHER OS02G0152300 PROTEIN 18 684 - -
Acco05g2098 708 SUPERFAMILY Protein kinase-like (PK-like) 392 667 IPR011009 -
Acco05g2098 708 Gene3D HUPs 10 135 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2098 Acco-ChrAcco05 37223748 37227476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2098 87 683 Receptor kinase-like Gene Family AT5G12000 60.325 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Acco05g2098 PK_Tyr_Ser-Thr 3.6e-39 CL0016