Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2092 ATGCTCTTGCTCTTACAATTCATTGATAATGCGAATGTTTGGTGGGCTACTCAATGTGATATCCGCCTCTATGATCAATGCGTTTGTAAATGCAAACTGTTGTTTTGGACCTCTTGCTTTATTGTTGAATTGGACAGTTCATGTGAACTTTTTACAATCATGGCTAGCTTGGCACCAGAAGGGTCGCAATTTGATGCTCGTCAATTTGATGCTAAGATGAATGAATTACTTGGAACTGAAGGGCAGGACTTTTTTACTAGTTATGATGAAGTTTATGAAAGCTTTGATGCTATGGGATTGCAGGAGAACCTTCTGAGAGGCATTTATGCTTATGGTTTCGAGAAGCCCTCTGCAATTCAGCAAAGAGGGATTGTTCCTTTCTGCAAGGGTCTTGATGTGATTCAGCAGGCGCAATCTGGAACTGGAAAAACCGCCACTTTTTGTTCTGGAATTTTGCAGCAGCTTGATTACAGCTTATTTGAATGCCAAGCACTGGTTCTTGCTCCTACTCGTGAACTTGCACAACAAATTGAGAAGGTCATGCGAGCACTGGGTGACTATCTTGGCGTCAAGGTTCATGCTTGTGTGGGGGGCACCAGTGTCCGGGAAGACCAACGTATCCTCTCAAGTGGGGTGCATGTTGTTGTTGGTACCCCTGGTCGTGTGTTTGACATGCTTCGGAGACAATCTCTCCGCCCTGATTACATTCGAATGTTTGTGTTGGATGAGGCAGATGAGATGCTTTCTAGGGGTTTCAAGGATCAGATCTATGATATTTTCCAGCTGCTGCCGCCAAAAATTCAGGTTGGGGTTTTCTCCGCTACCATGCCTCCTGAGGCTCTTGAGATTACAAGGAAGTTCATGAATAAACCTGTGAGGATCTTGGTGAAGCGTGATGAGCTTACCTTGGAAGGGATCAAGCAATTTTACGTCAATGTTGAGAGGGAGGAATGGAAGTTGGAGACACTTTGTGATCTTTATGAGACATTGGCAATCACCCAAAGTGTTATCTTTGTGAACACCAGGCGCAAGGTGGATTGGCTTACAGACAAGATGCGCAGCCGTGATCACACTGTTTCTGCAACGCATGGAGATATGGACCAAAACACAAGGGATATCATCATGAGGGAATTCCGTTCTGGGTCTTCCCGTGTCTTAATCACCACAGATTTATTAGCCCGTGGTATTGATGTCCAGCAAGTTTCCCTTGTGATTAATTACGATCTTCCAACCCAGCCAGAGAACTACCTGCATCGAATTGGTCGTAGCGGTCGGTTTGGGAGGAAGGGTGTTGCTATTAACTTTGTGACCAAGGACGATGATAGGATGCTGTTTGACATTCAAAAGTTCTATAATGTGGTGATTGAAGAACTGCCAGCCAATGTTGCTGATCTCCTTTGA 1401 0.4468 MLLLLQFIDNANVWWATQCDIRLYDQCVCKCKLLFWTSCFIVELDSSCELFTIMASLAPEGSQFDARQFDAKMNELLGTEGQDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLFECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEREEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDDRMLFDIQKFYNVVIEELPANVADLL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2092 466 FunFam Eukaryotic initiation factor 4A-II 81 300 - -
Acco05g2092 466 Pfam DEAD/DEAH box helicase 118 279 IPR011545 GO:0003676|GO:0005524
Acco05g2092 466 SMART helicmild6 346 427 IPR001650 -
Acco05g2092 466 FunFam Eukaryotic initiation factor 4A-III 301 466 - -
Acco05g2092 466 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 124 294 IPR014001 -
Acco05g2092 466 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 305 466 IPR001650 -
Acco05g2092 466 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 240 248 IPR000629 -
Acco05g2092 466 CDD SF2_C_DEAD 306 436 - -
Acco05g2092 466 PANTHER RNA HELICASE 82 450 - -
Acco05g2092 466 Pfam Helicase conserved C-terminal domain 319 427 IPR001650 -
Acco05g2092 466 CDD DEADc_EIF4A 97 295 - -
Acco05g2092 466 Gene3D - 83 301 IPR027417 -
Acco05g2092 466 SMART ultradead3 112 309 IPR014001 -
Acco05g2092 466 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 93 121 IPR014014 GO:0003724
Acco05g2092 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 447 IPR027417 -
Acco05g2092 466 Gene3D - 302 466 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2092 Acco-ChrAcco05 37164907 37167476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2092 54 466 Eukaryotic Initiation Factors Gene Family AT1G72730 88.406 0.0 763